Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC112653.1-201ENST00000443851 386 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 HSFY6P-201ENST00000445573 403 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT40Q6A162 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.93□□□□□ -1.62
KRT40Q6A162 RPS15AP17-201ENST00000470598 390 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 AC017015.1-201ENST00000477387 286 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 RPS3AP14-201ENST00000483907 780 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.93□□□□□ -1.62
KRT40Q6A162 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT40Q6A162 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AC090515.3-201ENST00000560431 315 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 LARP7P2-201ENST00000575306 125 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.93□□□□□ -1.62
KRT40Q6A162 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AC093775.1-201ENST00000624154 1868 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT40Q6A162 MIR492-201ENST00000638676 116 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.93□□□□□ -1.62
KRT40Q6A162 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
KRT40Q6A162 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRT40Q6A162 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRT40Q6A162 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT40Q6A162 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 RNY4P14-201ENST00000363656 96 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 RNA5SP366-201ENST00000365454 123 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.92□□□□□ -1.62
KRT40Q6A162 Y_RNA.453-201ENST00000384223 109 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 DHFRP6-201ENST00000401776 268 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 HMGB1P17-201ENST00000403495 628 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 PPIAP31-201ENST00000405422 495 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KRT40Q6A162 FCF1P10-201ENST00000407590 479 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 PRELID3BP11-201ENST00000414230 479 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 BX295541.1-201ENST00000417774 250 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.92□□□□□ -1.62
KRT40Q6A162 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.92□□□□□ -1.62
KRT40Q6A162 DPPA3P1-201ENST00000448050 469 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 AC092001.1-201ENST00000453012 261 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 Z82190.1-201ENST00000454534 490 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 MTCO1P42-201ENST00000457379 726 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.92□□□□□ -1.62
KRT40Q6A162 TMEM251P1-201ENST00000503717 318 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.92□□□□□ -1.62
KRT40Q6A162 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 RNU6-488P-201ENST00000515918 99 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 SNORA20.3-201ENST00000516880 132 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 OR5AQ1P-201ENST00000527596 927 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 RPL21P5-201ENST00000554662 472 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 CYP4A43P-201ENST00000568156 121 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.92□□□□□ -1.62
KRT40Q6A162 BNIP3P11-201ENST00000603878 563 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 TUG1_1.1-201ENST00000610654 145 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
KRT40Q6A162 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.92□□□□□ -1.62
KRT40Q6A162 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KRT40Q6A162 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 AC134882.1-201ENST00000603738 1676 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 Z95327.2-201ENST00000414579 1873 ntBASIC4.92□□□□□ -1.62
KRT40Q6A162 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.92□□□□□ -1.62
KRT40Q6A162 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT40Q6A162 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.92□□□□□ -1.62
KRT40Q6A162 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRT40Q6A162 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.91□□□□□ -1.62
KRT40Q6A162 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRT40Q6A162 AL158163.1-201ENST00000603915 1649 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT40Q6A162 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRT40Q6A162 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRT40Q6A162 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRT40Q6A162 U8.3-201ENST00000363321 132 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 RNU6-921P-201ENST00000384361 107 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 RNA5SP36-201ENST00000410197 133 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 RN7SKP235-201ENST00000410662 305 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 RNU6-195P-201ENST00000411352 109 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 CYCSP19-201ENST00000411715 316 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 USP9YP36-201ENST00000424581 829 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms