Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC004866.2-201ENST00000438285 481 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 NDUFS5P3-201ENST00000450668 321 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 AP000926.3-201ENST00000497201 299 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 AC091488.1-201ENST00000604239 660 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 U6.98-201ENST00000637157 84 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 MIR6073-201ENST00000352083 89 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 RNU6-548P-201ENST00000517083 115 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 AC011494.1-201ENST00000596454 237 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 AL137847.3-201ENST00000611521 109 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 AP003499.2-201ENST00000624100 483 ntBASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CDC42BPAQ5VT25 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDC42BPAQ5VT25 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.21□□□□□ -1.9
CDC42BPAQ5VT25 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.21□□□□□ -1.9
CDC42BPAQ5VT25 MTND5P21-201ENST00000531961 522 ntBASIC3.21□□□□□ -1.9
CDC42BPAQ5VT25 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 AL627309.6-201ENST00000606857 840 ntBASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 YWHAEP7-203ENST00000622054 312 ntBASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CDC42BPAQ5VT25 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 RPL23AP42-201ENST00000471152 471 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 AP000926.1-201ENST00000479573 241 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 CCNHP1-201ENST00000513311 678 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 RNU6-295P-201ENST00000516901 104 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 AP000942.3-201ENST00000603702 160 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 RNU6-1159P-201ENST00000362933 107 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 AL445646.1-201ENST00000431784 216 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 AL035551.1-201ENST00000446931 348 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 ATG10-AS1-201ENST00000504846 648 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 MIR6132-201ENST00000622083 109 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 AC244517.12-201ENST00000623581 663 ntBASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPAQ5VT25 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 AC003989.2-201ENST00000440224 169 ntBASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 AC007677.1-201ENST00000445757 515 ntBASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 AC072039.1-201ENST00000477611 581 ntBASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 AC092184.1-201ENST00000625042 715 ntBASIC3.18□□□□□ -1.9
CDC42BPAQ5VT25 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 AL359893.1-201ENST00000447628 1580 ntBASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 OR4G2P-202ENST00000641004 1759 ntBASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 MTND4P35-201ENST00000604257 1375 ntBASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CDC42BPAQ5VT25 AL096701.2-201ENST00000416920 238 ntBASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 AC009961.3-201ENST00000449832 765 ntBASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 RN7SKP210-201ENST00000459176 261 ntBASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 OR9N1P-201ENST00000491296 333 ntBASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 AL592045.1-201ENST00000429867 352 ntBASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 IGHV3-76-201ENST00000522465 295 ntBASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 MIR5002-201ENST00000584713 97 ntBASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC42BPAQ5VT25 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.15□□□□□ -1.9
CDC42BPAQ5VT25 AC011460.1-201ENST00000636268 1834 ntBASIC3.15□□□□□ -1.91
CDC42BPAQ5VT25 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.15□□□□□ -1.91
CDC42BPAQ5VT25 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDC42BPAQ5VT25 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms