Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AMD1P2-201ENST00000412936 992 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AL359265.2-201ENST00000434367 631 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AL121871.1-201ENST00000443413 436 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 CYCSP24-201ENST00000445119 316 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC104651.2-201ENST00000447549 528 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 RN7SL481P-201ENST00000477764 299 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 CEACAMP10-202ENST00000495431 496 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 SCARNA22-201ENST00000503991 125 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 OR51K1P-201ENST00000510214 950 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC074344.1-201ENST00000512823 224 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC026801.2-201ENST00000515352 425 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 RNU1-6P-201ENST00000516290 144 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 SCARNA24.1-201ENST00000516465 137 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AP003072.2-201ENST00000527756 676 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC104383.1-201ENST00000530297 370 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AL121579.1-201ENST00000555129 305 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AL359219.2-201ENST00000555184 348 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC105224.1-201ENST00000587055 421 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC093838.1-201ENST00000613014 469 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AL603758.1-201ENST00000618654 241 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC244100.1-202ENST00000621554 382 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 AL442639.1-201ENST00000625030 1899 ntBASIC4.88□□□□□ -1.63
FNDC3BQ53EP0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RNU1-82P-201ENST00000390851 165 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RNA5SP332-201ENST00000391063 115 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RPS4XP8-201ENST00000402039 771 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC009237.5-201ENST00000414271 501 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC068287.1-201ENST00000430283 295 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 NEK4P1-201ENST00000433383 879 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 MTCO3P18-201ENST00000440206 761 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 MTND3P10-201ENST00000450967 341 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RPL36AP13-201ENST00000457490 317 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RPL36AP51-201ENST00000487216 318 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RPS15AP36-201ENST00000492022 382 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC093278.1-201ENST00000494700 600 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC069439.1-201ENST00000494739 167 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RN7SL558P-201ENST00000497468 299 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC111000.3-201ENST00000508057 576 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC091868.1-201ENST00000508746 304 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RNU7-51P-201ENST00000516560 62 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RNU6-709P-201ENST00000517257 104 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 PDCD5P1-201ENST00000543528 309 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC128657.1-201ENST00000549459 145 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC040958.1-201ENST00000561102 201 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC034105.3-201ENST00000565294 442 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 HMGB1P6-201ENST00000569046 646 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC008752.3-201ENST00000588113 712 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 GLUD1P4-201ENST00000590914 418 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC068790.4-201ENST00000602474 263 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 NRBF2P5-201ENST00000603087 788 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RNA5SP108-201ENST00000605921 117 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AL357078.3-201ENST00000607528 618 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC004067.1-201ENST00000608733 700 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AC005609.4-201ENST00000625071 447 ntBASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FNDC3BQ53EP0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms