Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 AC034268.2-201ENST00000571784 482 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 MIR4307-201ENST00000582802 84 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AC022916.3-201ENST00000592961 742 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AC010620.1-201ENST00000601088 1102 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AL590229.1-201ENST00000603497 542 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AC092354.2-201ENST00000607786 514 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AL590282.1-201ENST00000610379 1136 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AL713922.2-201ENST00000619384 716 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 U7.8-201ENST00000619968 63 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AC112200.1-201ENST00000625015 234 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AC140479.6-201ENST00000633535 357 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC38Q502W7 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC38Q502W7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 USP8P1-201ENST00000494673 3183 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC38Q502W7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AL158163.1-201ENST00000603915 1649 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC007685.1-201ENST00000329806 452 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 RNY4P24-201ENST00000362735 96 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 RNU1-32P-201ENST00000363937 159 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 SNORA51.2-201ENST00000364595 132 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC38Q502W7 MT-TH-201ENST00000387441 69 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 U8.14-201ENST00000390843 143 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 U3.22-201ENST00000391120 215 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 RNU11-4P-201ENST00000391149 133 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 SNORA3C-201ENST00000408792 125 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC109780.2-201ENST00000413467 845 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 BX119904.4-201ENST00000424402 301 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AL512326.1-201ENST00000443050 721 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC112653.1-201ENST00000443851 386 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 FAM103A2P-201ENST00000444122 354 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 BMI1P1-201ENST00000445879 941 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 RPL5P32-201ENST00000454085 879 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC104308.1-201ENST00000454621 333 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 RPL23AP24-201ENST00000458203 385 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 snoU13.1-201ENST00000459157 104 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC069499.1-201ENST00000489433 509 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 RNA5SP143-201ENST00000516936 115 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 SETP2-201ENST00000553886 926 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC091489.2-201ENST00000566263 604 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC008507.1-201ENST00000587506 734 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC110760.3-201ENST00000598794 467 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC068790.4-201ENST00000602474 263 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 Z94722.1-201ENST00000604328 474 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AL022161.1-201ENST00000604390 213 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AC012360.2-201ENST00000609349 391 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 AL731566.2-201ENST00000618971 317 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.29□□□□□ -1.72
CCDC38Q502W7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC38Q502W7 PABPC1P9-201ENST00000426076 1612 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC38Q502W7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC38Q502W7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC38Q502W7 RNU6-1074P-201ENST00000383995 104 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 Y_RNA.548-201ENST00000384656 105 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 AL159169.1-201ENST00000421119 127 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AL157831.1-201ENST00000426134 473 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC109583.1-201ENST00000432156 268 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 UBE2V1P13-201ENST00000436983 439 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AL138799.3-201ENST00000438968 350 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms