Protein–RNA interactions for Protein: Q13509

TUBB3, Tubulin beta-3 chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3Q13509 AL662791.1-201ENST00000441992 928 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AL512326.1-201ENST00000443050 721 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 RPL21P133-201ENST00000443666 476 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 FAM103A2P-201ENST00000444122 354 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.41□□□□□ -1.7
TUBB3Q13509 FABP3P2-201ENST00000453169 399 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.41□□□□□ -1.7
TUBB3Q13509 RPL38P1-201ENST00000460914 211 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AC104563.1-201ENST00000476147 376 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 RPS3AP14-201ENST00000483907 780 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AP001025.2-201ENST00000490908 477 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 KCTD9P5-201ENST00000504141 1170 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.41□□□□□ -1.7
TUBB3Q13509 AC093824.1-201ENST00000508796 343 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AC008549.1-201ENST00000512900 643 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AC010342.1-201ENST00000514047 877 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.41□□□□□ -1.7
TUBB3Q13509 IFITM8P-201ENST00000522529 394 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AP003181.2-201ENST00000528941 181 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AC118273.2-201ENST00000532092 465 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.41□□□□□ -1.7
TUBB3Q13509 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.41□□□□□ -1.7
TUBB3Q13509 AL390208.1-201ENST00000605885 644 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AC004067.1-201ENST00000608733 700 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.41□□□□□ -1.7
TUBB3Q13509 MLECP1-201ENST00000615893 709 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 NXPH1-205ENST00000602349 1953 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.41□□□□□ -1.7
TUBB3Q13509 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.41□□□□□ -1.7
TUBB3Q13509 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.41□□□□□ -1.7
TUBB3Q13509 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 RAD17P1-201ENST00000418130 2042 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.41□□□□□ -1.7
TUBB3Q13509 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.41□□□□□ -1.7
TUBB3Q13509 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TUBB3Q13509 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TUBB3Q13509 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TUBB3Q13509 ELL2P4-201ENST00000446870 1376 ntBASIC4.4□□□□□ -1.7
TUBB3Q13509 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.4□□□□□ -1.7
TUBB3Q13509 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
TUBB3Q13509 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.4□□□□□ -1.7
TUBB3Q13509 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.4□□□□□ -1.7
TUBB3Q13509 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TUBB3Q13509 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.4□□□□□ -1.7
TUBB3Q13509 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.4□□□□□ -1.7
TUBB3Q13509 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TUBB3Q13509 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
TUBB3Q13509 AC021146.4-201ENST00000309229 279 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 RNU1-15P-201ENST00000353977 144 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 MIR448-201ENST00000362131 111 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 RNU6-780P-201ENST00000391030 104 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 RNU4-55P-201ENST00000410731 137 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 RPL36AP36-201ENST00000418616 301 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 MTCO2P5-201ENST00000422621 426 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 NANOGP6-201ENST00000429190 847 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.4□□□□□ -1.71
TUBB3Q13509 NFU1P2-201ENST00000448700 469 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.4□□□□□ -1.71
TUBB3Q13509 PLGLA-201ENST00000465668 449 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 PABPC1P3-201ENST00000469174 459 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.4□□□□□ -1.71
TUBB3Q13509 AC019235.1-201ENST00000503847 207 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 HMGB1P29-201ENST00000505659 499 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 RNU6-714P-201ENST00000516963 103 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.4□□□□□ -1.71
TUBB3Q13509 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 CYP4A43P-201ENST00000568156 121 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TUBB3Q13509 AC006504.3-201ENST00000586818 523 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.4□□□□□ -1.71
TUBB3Q13509 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
TUBB3Q13509 MIR6715B-201ENST00000637172 77 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.4□□□□□ -1.71
TUBB3Q13509 AC016588.2-201ENST00000632484 3021 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TUBB3Q13509 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TUBB3Q13509 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TUBB3Q13509 AC022893.2-201ENST00000564832 3296 ntBASIC4.4□□□□□ -1.71
TUBB3Q13509 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TUBB3Q13509 AC090229.1-201ENST00000590983 1609 ntBASIC4.39□□□□□ -1.71
TUBB3Q13509 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TUBB3Q13509 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TUBB3Q13509 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TUBB3Q13509 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.39□□□□□ -1.71
TUBB3Q13509 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TUBB3Q13509 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TUBB3Q13509 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms