Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC1.64□□□□□ -2.15
RPS28P62857 AC034159.1-201ENST00000513885 583 ntBASIC1.64□□□□□ -2.15
RPS28P62857 RNU2-44P-201ENST00000516795 194 ntBASIC1.64□□□□□ -2.15
RPS28P62857 SCARNA11.3-201ENST00000517276 130 ntBASIC1.64□□□□□ -2.15
RPS28P62857 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.64□□□□□ -2.15
RPS28P62857 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS28P62857 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RPS28P62857 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC1.64□□□□□ -2.15
RPS28P62857 LSM6P2-201ENST00000552208 177 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RPS28P62857 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS28P62857 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC1.64□□□□□ -2.15
RPS28P62857 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS28P62857 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS28P62857 CBX3P2-202ENST00000583365 535 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC1.64□□□□□ -2.15
RPS28P62857 CCDC58P3-201ENST00000590792 430 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC078899.2-201ENST00000595282 212 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC013444.2-201ENST00000603317 787 ntBASIC1.64□□□□□ -2.15
RPS28P62857 ACTR3BP1-201ENST00000605584 1247 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AL627230.6-201ENST00000611129 280 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AL592148.2-201ENST00000612210 372 ntBASIC1.64□□□□□ -2.15
RPS28P62857 STMN1P1-201ENST00000617809 440 ntBASIC1.64□□□□□ -2.15
RPS28P62857 FP236240.3-201ENST00000623061 327 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AL691477.1-201ENST00000624398 162 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RPS28P62857 AP000553.5-201ENST00000641933 54 ntBASIC1.64□□□□□ -2.15
RPS28P62857 CASC19-274ENST00000642018 970 ntBASIC1.64□□□□□ -2.15
RPS28P62857 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPS28P62857 TAB3P1-202ENST00000452645 1634 ntBASIC1.64□□□□□ -2.15
RPS28P62857 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.64□□□□□ -2.15
RPS28P62857 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPS28P62857 MTCO1P6-201ENST00000481192 1384 ntBASIC1.63□□□□□ -2.15
RPS28P62857 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RPS28P62857 AC126755.2-208ENST00000327792 462 ntBASIC1.63□□□□□ -2.15
RPS28P62857 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPS28P62857 RPL21P132-201ENST00000331267 462 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AC138969.1-213ENST00000331436 462 ntBASIC1.63□□□□□ -2.15
RPS28P62857 DEFB108F-201ENST00000344638 222 ntBASIC1.63□□□□□ -2.15
RPS28P62857 RNA5SP68-201ENST00000363885 119 ntBASIC1.63□□□□□ -2.15
RPS28P62857 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPS28P62857 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RPS28P62857 RNU6-882P-201ENST00000391025 103 ntBASIC1.63□□□□□ -2.15
RPS28P62857 NPM1P10-201ENST00000398310 865 ntBASIC1.63□□□□□ -2.15
RPS28P62857 CYCSP19-201ENST00000411715 316 ntBASIC1.63□□□□□ -2.15
RPS28P62857 RPLP0P7-201ENST00000416050 667 ntBASIC1.63□□□□□ -2.15
RPS28P62857 BRWD1P3-201ENST00000428816 390 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AC023141.6-201ENST00000429418 337 ntBASIC1.63□□□□□ -2.15
RPS28P62857 TEX41-205ENST00000431734 529 ntTSL 4 BASIC1.63□□□□□ -2.15
RPS28P62857 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC1.63□□□□□ -2.15
RPS28P62857 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS28P62857 MTND1P33-201ENST00000446251 917 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AC005002.1-201ENST00000447458 540 ntBASIC1.63□□□□□ -2.15
RPS28P62857 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
RPS28P62857 DYNLL1P5-201ENST00000467158 270 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC1.63□□□□□ -2.15
RPS28P62857 AL132838.2-201ENST00000492041 314 ntBASIC1.63□□□□□ -2.15
RPS28P62857 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPS28P62857 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS28P62857 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPS28P62857 RNU6-27P-201ENST00000516146 107 ntBASIC1.63□□□□□ -2.15
RPS28P62857 RNA5SP271-201ENST00000516700 88 ntBASIC1.63□□□□□ -2.15
RPS28P62857 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS28P62857 DEFB108D-201ENST00000527787 222 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC1.63□□□□□ -2.15
RPS28P62857 MTCYBP27-201ENST00000555160 670 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS28P62857 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS28P62857 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS28P62857 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS28P62857 AC067852.3-201ENST00000589177 561 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AC125494.3-201ENST00000602759 455 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AL121917.1-203ENST00000605534 577 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AC023206.1-201ENST00000605824 298 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AC005828.7-201ENST00000607331 556 ntBASIC1.63□□□□□ -2.15
RPS28P62857 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPS28P62857 AC009318.4-201ENST00000620496 486 ntBASIC1.63□□□□□ -2.15
RPS28P62857 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.63□□□□□ -2.15
RPS28P62857 AL355480.4-201ENST00000626823 69 ntBASIC1.63□□□□□ -2.15
RPS28P62857 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC1.63□□□□□ -2.15
RPS28P62857 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
RPS28P62857 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.63□□□□□ -2.15
RPS28P62857 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPS28P62857 C4BPAP1-201ENST00000415474 1893 ntBASIC1.63□□□□□ -2.15
RPS28P62857 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPS28P62857 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPS28P62857 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.62□□□□□ -2.15
RPS28P62857 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPS28P62857 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPS28P62857 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RPS28P62857 RNU6-152P-201ENST00000384037 107 ntBASIC1.62□□□□□ -2.15
RPS28P62857 SNORA70C-201ENST00000384538 135 ntBASIC1.62□□□□□ -2.15
RPS28P62857 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.62□□□□□ -2.15
RPS28P62857 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
RPS28P62857 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.62□□□□□ -2.15
RPS28P62857 BX510359.2-201ENST00000417920 305 ntBASIC1.62□□□□□ -2.15
RPS28P62857 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC1.62□□□□□ -2.15
RPS28P62857 RPP40P1-201ENST00000426762 456 ntBASIC1.62□□□□□ -2.15
RPS28P62857 AL590383.1-201ENST00000428602 75 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms