Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC109471.1-201ENST00000511631 612 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO4P61968 AC016065.2-201ENST00000514530 444 ntBASIC3.23□□□□□ -1.89
LMO4P61968 SCARNA14-201ENST00000516903 136 ntBASIC3.23□□□□□ -1.89
LMO4P61968 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.23□□□□□ -1.89
LMO4P61968 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO4P61968 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.23□□□□□ -1.89
LMO4P61968 GTF2IP22-201ENST00000554443 182 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO4P61968 MTCO3P24-201ENST00000572729 782 ntBASIC3.23□□□□□ -1.89
LMO4P61968 OR4G1P-201ENST00000588632 938 ntBASIC3.23□□□□□ -1.89
LMO4P61968 BNIP3P22-201ENST00000593399 556 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO4P61968 YWHAQP7-201ENST00000603536 658 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AP003973.1-201ENST00000604639 691 ntBASIC3.23□□□□□ -1.89
LMO4P61968 HSPE1P14-201ENST00000605812 302 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AL354760.1-201ENST00000608357 643 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC024560.3-201ENST00000608482 349 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC007684.1-201ENST00000609671 477 ntBASIC3.23□□□□□ -1.89
LMO4P61968 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LMO4P61968 AL357080.1-201ENST00000617394 239 ntBASIC3.23□□□□□ -1.89
LMO4P61968 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.23□□□□□ -1.89
LMO4P61968 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LMO4P61968 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.23□□□□□ -1.89
LMO4P61968 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LMO4P61968 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LMO4P61968 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.23□□□□□ -1.89
LMO4P61968 PABPC1P9-201ENST00000426076 1612 ntBASIC3.22□□□□□ -1.89
LMO4P61968 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO4P61968 AC004520.1-201ENST00000608362 1413 ntBASIC3.22□□□□□ -1.89
LMO4P61968 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.22□□□□□ -1.89
LMO4P61968 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 OR10J6P-201ENST00000289731 930 ntBASIC3.22□□□□□ -1.89
LMO4P61968 FGF7P2-201ENST00000332473 296 ntBASIC3.22□□□□□ -1.89
LMO4P61968 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMO4P61968 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMO4P61968 RNU6-348P-201ENST00000384386 107 ntBASIC3.22□□□□□ -1.89
LMO4P61968 MIR449B-201ENST00000384995 97 ntBASIC3.22□□□□□ -1.89
LMO4P61968 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 MTCO3P31-201ENST00000405526 789 ntBASIC3.22□□□□□ -1.89
LMO4P61968 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.22□□□□□ -1.89
LMO4P61968 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO4P61968 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO4P61968 DPPA2P1-201ENST00000428060 556 ntBASIC3.22□□□□□ -1.89
LMO4P61968 MTND1P28-201ENST00000435623 950 ntBASIC3.22□□□□□ -1.89
LMO4P61968 HMGB1P37-201ENST00000439613 609 ntBASIC3.22□□□□□ -1.89
LMO4P61968 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO4P61968 RANP8-201ENST00000444720 713 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO4P61968 NDUFA5P7-201ENST00000452914 242 ntBASIC3.22□□□□□ -1.89
LMO4P61968 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.22□□□□□ -1.89
LMO4P61968 SSXP1-201ENST00000453640 473 ntBASIC3.22□□□□□ -1.89
LMO4P61968 MTCO3P11-201ENST00000455103 774 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 AC022034.3-201ENST00000471393 478 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AC005726.1-201ENST00000494679 427 ntBASIC3.22□□□□□ -1.89
LMO4P61968 RNF138P1-201ENST00000502765 546 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO4P61968 AC011352.3-201ENST00000505162 593 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 AC006499.6-201ENST00000511169 607 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 AC025881.1-201ENST00000518851 512 ntBASIC3.22□□□□□ -1.89
LMO4P61968 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.22□□□□□ -1.89
LMO4P61968 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.22□□□□□ -1.89
LMO4P61968 OR5AK1P-201ENST00000524837 922 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.22□□□□□ -1.89
LMO4P61968 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LMO4P61968 OR4A12P-201ENST00000530847 918 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AP005205.1-201ENST00000563503 508 ntBASIC3.22□□□□□ -1.89
LMO4P61968 VN1R92P-201ENST00000598511 928 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AP000403.1-201ENST00000603349 851 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AL009028.1-201ENST00000604895 802 ntBASIC3.22□□□□□ -1.89
LMO4P61968 RNA5SP108-201ENST00000605921 117 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AC091946.2-201ENST00000606105 291 ntBASIC3.22□□□□□ -1.89
LMO4P61968 SNORA51-201ENST00000606420 132 ntBASIC3.22□□□□□ -1.89
LMO4P61968 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LMO4P61968 AL589743.7-201ENST00000612637 233 ntBASIC3.22□□□□□ -1.89
LMO4P61968 AC055839.1-201ENST00000634467 498 ntBASIC3.22□□□□□ -1.89
LMO4P61968 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LMO4P61968 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMO4P61968 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LMO4P61968 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.22□□□□□ -1.89
LMO4P61968 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LMO4P61968 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.22□□□□□ -1.89
LMO4P61968 AC106871.1-201ENST00000568324 3102 ntBASIC3.22□□□□□ -1.89
LMO4P61968 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
LMO4P61968 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.21□□□□□ -1.89
LMO4P61968 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
LMO4P61968 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
LMO4P61968 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
LMO4P61968 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LMO4P61968 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.21□□□□□ -1.9
LMO4P61968 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LMO4P61968 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms