Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH6P55285 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDH6P55285 ZNF849P-201ENST00000594711 1566 ntBASIC3.14□□□□□ -1.91
CDH6P55285 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH6P55285 MIR22-201ENST00000362190 85 ntBASIC3.14□□□□□ -1.91
CDH6P55285 RNU6-619P-201ENST00000365146 108 ntBASIC3.14□□□□□ -1.91
CDH6P55285 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH6P55285 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH6P55285 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH6P55285 KRR1P1-201ENST00000419430 803 ntBASIC3.14□□□□□ -1.91
CDH6P55285 RPS6P14-201ENST00000425165 719 ntBASIC3.14□□□□□ -1.91
CDH6P55285 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH6P55285 AL035410.1-201ENST00000427409 427 ntBASIC3.14□□□□□ -1.91
CDH6P55285 RPL23AP69-201ENST00000431134 458 ntBASIC3.14□□□□□ -1.91
CDH6P55285 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH6P55285 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH6P55285 AC104978.1-201ENST00000449387 391 ntBASIC3.14□□□□□ -1.91
CDH6P55285 AL136126.1-201ENST00000473603 402 ntBASIC3.14□□□□□ -1.91
CDH6P55285 RN7SL633P-201ENST00000488974 297 ntBASIC3.14□□□□□ -1.91
CDH6P55285 AC112518.2-201ENST00000508565 425 ntBASIC3.14□□□□□ -1.91
CDH6P55285 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH6P55285 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH6P55285 MTCYBP37-201ENST00000510642 1133 ntBASIC3.14□□□□□ -1.91
CDH6P55285 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.14□□□□□ -1.91
CDH6P55285 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
CDH6P55285 RNU6-711P-201ENST00000517255 106 ntBASIC3.14□□□□□ -1.91
CDH6P55285 AC239860.2-201ENST00000525886 270 ntBASIC3.14□□□□□ -1.91
CDH6P55285 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CDH6P55285 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.14□□□□□ -1.91
CDH6P55285 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH6P55285 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH6P55285 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CDH6P55285 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH6P55285 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH6P55285 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CDH6P55285 AC244517.1-201ENST00000606030 2086 ntBASIC3.13□□□□□ -1.91
CDH6P55285 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH6P55285 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH6P55285 TMSB4XP8-201ENST00000402089 135 ntBASIC3.13□□□□□ -1.91
CDH6P55285 GSTA8P-201ENST00000404253 637 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AL591034.1-201ENST00000407447 340 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AL023807.1-201ENST00000407932 359 ntBASIC3.13□□□□□ -1.91
CDH6P55285 TMSB4XP6-201ENST00000415187 135 ntBASIC3.13□□□□□ -1.91
CDH6P55285 HSPE1P1-201ENST00000421494 318 ntBASIC3.13□□□□□ -1.91
CDH6P55285 TMSB4XP1-201ENST00000424567 135 ntBASIC3.13□□□□□ -1.91
CDH6P55285 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH6P55285 OR2B8P-201ENST00000432841 938 ntBASIC3.13□□□□□ -1.91
CDH6P55285 MTND4P15-201ENST00000437913 1033 ntBASIC3.13□□□□□ -1.91
CDH6P55285 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH6P55285 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH6P55285 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH6P55285 AC010301.1-201ENST00000473936 355 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AC006445.1-201ENST00000491925 405 ntBASIC3.13□□□□□ -1.91
CDH6P55285 CAB39P1-201ENST00000502277 460 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH6P55285 RN7SKP272-201ENST00000516988 232 ntBASIC3.13□□□□□ -1.91
CDH6P55285 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH6P55285 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AC019227.1-201ENST00000526902 510 ntBASIC3.13□□□□□ -1.91
CDH6P55285 ZNF705CP-201ENST00000530515 889 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH6P55285 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH6P55285 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH6P55285 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH6P55285 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH6P55285 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH6P55285 AC124283.4-201ENST00000581815 456 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AP001029.3-201ENST00000588063 596 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AC124312.4-201ENST00000605533 310 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH6P55285 MIR8084-201ENST00000614105 89 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AL110115.1-201ENST00000614396 364 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AC007318.2-201ENST00000620999 243 ntBASIC3.13□□□□□ -1.91
CDH6P55285 AL590396.4-201ENST00000636779 956 ntBASIC3.13□□□□□ -1.91
CDH6P55285 API5P2-201ENST00000397055 1498 ntBASIC3.13□□□□□ -1.91
CDH6P55285 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH6P55285 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH6P55285 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CDH6P55285 AC103988.1-201ENST00000566382 2177 ntBASIC3.12□□□□□ -1.91
CDH6P55285 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH6P55285 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH6P55285 SNORA54-201ENST00000384281 123 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH6P55285 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AL512649.1-201ENST00000428997 581 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AC127537.2-201ENST00000439258 465 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AC140076.1-201ENST00000449897 361 ntBASIC3.12□□□□□ -1.91
CDH6P55285 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH6P55285 VPS26AP1-201ENST00000483197 979 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH6P55285 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH6P55285 AC011352.3-201ENST00000505162 593 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CDH6P55285 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH6P55285 AC105914.1-201ENST00000511798 226 ntBASIC3.12□□□□□ -1.91
CDH6P55285 SNORA31.26-201ENST00000517250 137 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH6P55285 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH6P55285 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH6P55285 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms