Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RN7SL261P-201ENST00000613441 282 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 AC129915.3-201ENST00000634128 948 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.65□□□□□ -1.51
RNF144AP50876 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
RNF144AP50876 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.65□□□□□ -1.51
RNF144AP50876 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.65□□□□□ -1.51
RNF144AP50876 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.65□□□□□ -1.51
RNF144AP50876 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.65□□□□□ -1.51
RNF144AP50876 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.65□□□□□ -1.51
RNF144AP50876 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
RNF144AP50876 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF144AP50876 AC116667.1-201ENST00000604855 2072 ntBASIC5.65□□□□□ -1.51
RNF144AP50876 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF144AP50876 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RNF144AP50876 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF144AP50876 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RNF144AP50876 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RNF144AP50876 RN7SKP292-201ENST00000365522 317 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 Y_RNA.480-201ENST00000384364 102 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 MIR1298-201ENST00000408783 112 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 RNU4-65P-201ENST00000410473 140 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 AL035422.1-201ENST00000414193 397 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 RPS23P10-201ENST00000416185 486 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 AL354707.3-201ENST00000427308 331 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 RPL23AP25-201ENST00000430973 463 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 RPEP5-201ENST00000441137 268 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 DAP3P1-201ENST00000441522 278 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 GAPDHP27-201ENST00000447427 1020 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 AC010631.1-201ENST00000474150 156 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 RPL31P60-201ENST00000478450 367 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF144AP50876 SNORA25.14-201ENST00000516481 132 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 IGKV2-23-201ENST00000518729 323 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 DEFB108E-201ENST00000524692 240 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
RNF144AP50876 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF144AP50876 MT1CP-201ENST00000567054 174 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 AC004584.2-201ENST00000570407 410 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 AC174048.1-201ENST00000603389 144 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 AL160281.1-201ENST00000605307 311 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 MIR6889-201ENST00000613185 59 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 AL731566.2-201ENST00000618971 317 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF144AP50876 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF144AP50876 AC073488.3-201ENST00000631611 778 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF144AP50876 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 AP002512.4-202ENST00000641599 4530 ntBASIC5.64□□□□□ -1.51
RNF144AP50876 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF144AP50876 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF144AP50876 GNL2P1-201ENST00000451274 2190 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
RNF144AP50876 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF144AP50876 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF144AP50876 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF144AP50876 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF144AP50876 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF144AP50876 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF144AP50876 HSPA8P1-201ENST00000425843 1833 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 Y_RNA.83-201ENST00000363005 113 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 SNORD1C-201ENST00000363315 78 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 RNU6-1303P-201ENST00000364841 107 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 MIR215-201ENST00000384858 110 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 GCNT1P4-201ENST00000404096 329 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 RNU6-1140P-201ENST00000410517 106 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 AC096921.1-201ENST00000411661 375 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 AL451074.5-201ENST00000415894 435 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 THEM7P-201ENST00000419556 672 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 RPL12P16-201ENST00000431098 498 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 AC108479.1-201ENST00000431142 427 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF144AP50876 AC008264.1-201ENST00000447612 367 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 AC022431.1-201ENST00000450941 438 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 AC007967.1-201ENST00000455422 1159 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF144AP50876 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF144AP50876 AC008945.1-201ENST00000505144 499 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF144AP50876 SNORA74.1-201ENST00000516320 180 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 IGLVIV-53-201ENST00000520107 367 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF144AP50876 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF144AP50876 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF144AP50876 AMZ2P1-203ENST00000565833 850 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF144AP50876 OR1E3-201ENST00000575608 948 ntBASIC5.63□□□□□ -1.51
RNF144AP50876 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF144AP50876 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms