Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.91□□□□□ -1.94
RFC3P40938 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.91□□□□□ -1.94
RFC3P40938 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.9□□□□□ -1.94
RFC3P40938 RPL23AP57-201ENST00000332361 466 ntBASIC2.9□□□□□ -1.95
RFC3P40938 RPL7P26-201ENST00000333817 754 ntBASIC2.9□□□□□ -1.95
RFC3P40938 AL121978.1-201ENST00000402778 359 ntBASIC2.9□□□□□ -1.95
RFC3P40938 RPL5P18-201ENST00000406671 891 ntBASIC2.9□□□□□ -1.95
RFC3P40938 RNU4-65P-201ENST00000410473 140 ntBASIC2.9□□□□□ -1.95
RFC3P40938 RNA5SP229-201ENST00000410809 99 ntBASIC2.9□□□□□ -1.95
RFC3P40938 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.9□□□□□ -1.95
RFC3P40938 AC012065.2-201ENST00000421295 375 ntBASIC2.9□□□□□ -1.95
RFC3P40938 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.9□□□□□ -1.95
RFC3P40938 CST9LP2-201ENST00000437612 320 ntBASIC2.9□□□□□ -1.95
RFC3P40938 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.9□□□□□ -1.95
RFC3P40938 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.9□□□□□ -1.95
RFC3P40938 snoU13.4-201ENST00000458916 104 ntBASIC2.9□□□□□ -1.95
RFC3P40938 NAP1L1P3-201ENST00000462291 880 ntBASIC2.9□□□□□ -1.95
RFC3P40938 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RFC3P40938 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RFC3P40938 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RFC3P40938 AC004062.1-201ENST00000509926 645 ntBASIC2.9□□□□□ -1.95
RFC3P40938 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.9□□□□□ -1.95
RFC3P40938 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.9□□□□□ -1.95
RFC3P40938 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RFC3P40938 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.9□□□□□ -1.95
RFC3P40938 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.9□□□□□ -1.95
RFC3P40938 AC022080.3-201ENST00000544433 482 ntBASIC2.9□□□□□ -1.95
RFC3P40938 LSM6P2-201ENST00000552208 177 ntBASIC2.9□□□□□ -1.95
RFC3P40938 AC011611.5-201ENST00000552477 578 ntBASIC2.9□□□□□ -1.95
RFC3P40938 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.9□□□□□ -1.95
RFC3P40938 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.9□□□□□ -1.95
RFC3P40938 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.9□□□□□ -1.95
RFC3P40938 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.9□□□□□ -1.95
RFC3P40938 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.9□□□□□ -1.95
RFC3P40938 uc_338.25-201ENST00000613756 156 ntBASIC2.9□□□□□ -1.95
RFC3P40938 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.9□□□□□ -1.95
RFC3P40938 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.9□□□□□ -1.95
RFC3P40938 AC084035.1-201ENST00000634543 607 ntBASIC2.9□□□□□ -1.95
RFC3P40938 MTND2P41-201ENST00000637599 773 ntBASIC2.9□□□□□ -1.95
RFC3P40938 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.9□□□□□ -1.95
RFC3P40938 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.9□□□□□ -1.95
RFC3P40938 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.9□□□□□ -1.95
RFC3P40938 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFC3P40938 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.9□□□□□ -1.95
RFC3P40938 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.9□□□□□ -1.95
RFC3P40938 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
RFC3P40938 AL645568.2-201ENST00000432815 1337 ntBASIC2.9□□□□□ -1.95
RFC3P40938 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.9□□□□□ -1.95
RFC3P40938 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFC3P40938 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RFC3P40938 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFC3P40938 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFC3P40938 RNU6-821P-201ENST00000390995 107 ntBASIC2.89□□□□□ -1.95
RFC3P40938 MIR887-201ENST00000401258 79 ntBASIC2.89□□□□□ -1.95
RFC3P40938 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.89□□□□□ -1.95
RFC3P40938 BMS1P22-201ENST00000414726 313 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.89□□□□□ -1.95
RFC3P40938 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.89□□□□□ -1.95
RFC3P40938 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.89□□□□□ -1.95
RFC3P40938 YWHAZP7-201ENST00000436906 631 ntBASIC2.89□□□□□ -1.95
RFC3P40938 ISCA1P2-201ENST00000438679 421 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AL831737.1-201ENST00000441288 271 ntBASIC2.89□□□□□ -1.95
RFC3P40938 HSPE1P28-201ENST00000443139 211 ntBASIC2.89□□□□□ -1.95
RFC3P40938 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFC3P40938 AL049873.1-201ENST00000480540 376 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AC093278.1-201ENST00000494700 600 ntBASIC2.89□□□□□ -1.95
RFC3P40938 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RFC3P40938 AC108078.3-201ENST00000502633 489 ntBASIC2.89□□□□□ -1.95
RFC3P40938 OR5H3P-201ENST00000502817 919 ntBASIC2.89□□□□□ -1.95
RFC3P40938 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.89□□□□□ -1.95
RFC3P40938 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.89□□□□□ -1.95
RFC3P40938 RNU1-103P-201ENST00000516502 125 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AC009812.2-201ENST00000517657 457 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AP000790.1-201ENST00000528891 737 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.89□□□□□ -1.95
RFC3P40938 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFC3P40938 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
RFC3P40938 NIFKP8-201ENST00000560500 874 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AL137843.1-201ENST00000605078 385 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AC124312.4-201ENST00000605533 310 ntBASIC2.89□□□□□ -1.95
RFC3P40938 AC135507.2-201ENST00000612443 309 ntBASIC2.89□□□□□ -1.95
RFC3P40938 MIR8084-201ENST00000614105 89 ntBASIC2.89□□□□□ -1.95
RFC3P40938 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.89□□□□□ -1.95
RFC3P40938 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.89□□□□□ -1.95
RFC3P40938 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFC3P40938 AC110774.1-201ENST00000623567 2018 ntBASIC2.88□□□□□ -1.95
RFC3P40938 ZNF849P-201ENST00000594711 1566 ntBASIC2.88□□□□□ -1.95
RFC3P40938 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFC3P40938 MTND5P19-201ENST00000424872 1794 ntBASIC2.88□□□□□ -1.95
RFC3P40938 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RFC3P40938 SAR1AP2-201ENST00000392696 594 ntBASIC2.88□□□□□ -1.95
RFC3P40938 AP002784.2-201ENST00000397300 549 ntBASIC2.88□□□□□ -1.95
RFC3P40938 UBA52P6-201ENST00000399822 382 ntBASIC2.88□□□□□ -1.95
RFC3P40938 AL138885.1-201ENST00000405921 675 ntBASIC2.88□□□□□ -1.95
RFC3P40938 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.88□□□□□ -1.95
RFC3P40938 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFC3P40938 AC246680.2-201ENST00000422106 389 ntBASIC2.88□□□□□ -1.95
RFC3P40938 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.88□□□□□ -1.95
RFC3P40938 AL035410.1-201ENST00000427409 427 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms