Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.58□□□□□ -1.52
PDE6BP35913 MIR331-201ENST00000362302 94 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDE6BP35913 SUGT1P1-201ENST00000379514 476 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 Y_RNA.419-201ENST00000384041 102 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 RNU6-1151P-201ENST00000384684 107 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.58□□□□□ -1.52
PDE6BP35913 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.58□□□□□ -1.52
PDE6BP35913 SNRPFP1-201ENST00000414761 252 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.58□□□□□ -1.52
PDE6BP35913 PDCL2P1-201ENST00000419302 352 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.58□□□□□ -1.52
PDE6BP35913 AC062016.2-201ENST00000420950 676 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.58□□□□□ -1.52
PDE6BP35913 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.58□□□□□ -1.52
PDE6BP35913 COX6CP15-201ENST00000426313 211 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.58□□□□□ -1.52
PDE6BP35913 AC004938.1-201ENST00000438468 308 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.58□□□□□ -1.52
PDE6BP35913 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.58□□□□□ -1.52
PDE6BP35913 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
PDE6BP35913 AC010307.1-201ENST00000467206 836 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 AL132838.2-201ENST00000492041 314 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 KCTD9P5-201ENST00000504141 1170 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 HMGB1P28-201ENST00000507778 552 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 KCTD9P2-201ENST00000512203 1013 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 RNU6-327P-201ENST00000516270 127 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 RNU6-1045P-201ENST00000516321 107 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 AC023632.4-201ENST00000517783 191 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.58□□□□□ -1.52
PDE6BP35913 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.58□□□□□ -1.52
PDE6BP35913 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.58□□□□□ -1.52
PDE6BP35913 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.58□□□□□ -1.52
PDE6BP35913 AC008127.2-201ENST00000549925 1075 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 PSMA3P-201ENST00000555485 635 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.58□□□□□ -1.52
PDE6BP35913 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.58□□□□□ -1.52
PDE6BP35913 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDE6BP35913 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDE6BP35913 AL731532.2-201ENST00000623542 1953 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDE6BP35913 SMG1P4-204ENST00000523028 4131 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 CDR1-202ENST00000625883 1485 ntBASIC5.58□□□□□ -1.52
PDE6BP35913 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDE6BP35913 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDE6BP35913 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PDE6BP35913 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 OR5BR1P-201ENST00000524992 1330 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.57□□□□□ -1.52
PDE6BP35913 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 Z73965.1-201ENST00000623412 2297 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 Y_RNA.1-201ENST00000352915 104 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 Y_RNA.86-201ENST00000363020 111 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 RNU4-44P-201ENST00000363050 141 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 RNA5SP283-201ENST00000365604 119 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PDE6BP35913 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDE6BP35913 RNU6-878P-201ENST00000384578 110 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.57□□□□□ -1.52
PDE6BP35913 USP9YP36-201ENST00000424581 829 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 AC006946.1-201ENST00000429106 328 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 RABEPKP1-201ENST00000440529 1026 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.57□□□□□ -1.52
PDE6BP35913 RN7SL132P-201ENST00000478131 296 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 AC015724.1-201ENST00000478577 156 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.57□□□□□ -1.52
PDE6BP35913 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.57□□□□□ -1.52
PDE6BP35913 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.57□□□□□ -1.52
PDE6BP35913 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.57□□□□□ -1.52
PDE6BP35913 AC108064.1-201ENST00000513791 460 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 RNU6-885P-201ENST00000516607 104 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 RNA5SP135-201ENST00000517019 125 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 AP003122.4-201ENST00000530980 758 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 AL512310.1-201ENST00000548639 172 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.57□□□□□ -1.52
PDE6BP35913 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.57□□□□□ -1.52
PDE6BP35913 LLPHP1-201ENST00000603571 367 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 AL391646.1-201ENST00000603860 190 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 AC103710.4-201ENST00000609301 899 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.57□□□□□ -1.52
PDE6BP35913 AC140479.6-201ENST00000633535 357 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 AL445487.1-201ENST00000415694 1580 ntBASIC5.57□□□□□ -1.52
PDE6BP35913 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDE6BP35913 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDE6BP35913 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.56□□□□□ -1.52
PDE6BP35913 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDE6BP35913 AL158163.1-201ENST00000603915 1649 ntBASIC5.56□□□□□ -1.52
PDE6BP35913 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.56□□□□□ -1.52
PDE6BP35913 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.56□□□□□ -1.52
PDE6BP35913 LINC00622-201ENST00000562811 1570 ntBASIC5.56□□□□□ -1.52
PDE6BP35913 AC011155.1-201ENST00000316512 456 ntBASIC5.56□□□□□ -1.52
PDE6BP35913 MIR372-201ENST00000362225 67 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms