Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
VARSP26640 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.06□□□□□ -1.44
VARSP26640 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.06□□□□□ -1.44
VARSP26640 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 AC027229.1-201ENST00000583887 253 ntBASIC6.06□□□□□ -1.44
VARSP26640 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.06□□□□□ -1.44
VARSP26640 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.06□□□□□ -1.44
VARSP26640 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.06□□□□□ -1.44
VARSP26640 AL161616.1-201ENST00000611867 286 ntBASIC6.06□□□□□ -1.44
VARSP26640 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.06□□□□□ -1.44
VARSP26640 MIR1244-1-201ENST00000612829 85 ntBASIC6.06□□□□□ -1.44
VARSP26640 RNA5SP439-201ENST00000617595 124 ntBASIC6.06□□□□□ -1.44
VARSP26640 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.06□□□□□ -1.44
VARSP26640 MIR1244-3-201ENST00000635744 85 ntBASIC6.06□□□□□ -1.44
VARSP26640 MIR1244-2-201ENST00000636449 85 ntBASIC6.06□□□□□ -1.44
VARSP26640 MIR1244-4-202ENST00000636813 85 ntBASIC6.06□□□□□ -1.44
VARSP26640 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.06□□□□□ -1.44
VARSP26640 CASC19-246ENST00000641625 1606 ntBASIC6.06□□□□□ -1.44
VARSP26640 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.06□□□□□ -1.44
VARSP26640 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.05□□□□□ -1.44
VARSP26640 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
VARSP26640 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.05□□□□□ -1.44
VARSP26640 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VARSP26640 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.05□□□□□ -1.44
VARSP26640 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.05□□□□□ -1.44
VARSP26640 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
VARSP26640 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARSP26640 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
VARSP26640 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
VARSP26640 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARSP26640 OR52B3P-201ENST00000314715 928 ntBASIC6.05□□□□□ -1.44
VARSP26640 MIR1298-201ENST00000408783 112 ntBASIC6.05□□□□□ -1.44
VARSP26640 RPL21P24-201ENST00000413752 448 ntBASIC6.05□□□□□ -1.44
VARSP26640 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.05□□□□□ -1.44
VARSP26640 AC113412.1-201ENST00000425840 504 ntBASIC6.05□□□□□ -1.44
VARSP26640 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.05□□□□□ -1.44
VARSP26640 AC127537.2-201ENST00000439258 465 ntBASIC6.05□□□□□ -1.44
VARSP26640 PPIAP20-201ENST00000449839 135 ntBASIC6.05□□□□□ -1.44
VARSP26640 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.05□□□□□ -1.44
VARSP26640 AC010733.1-201ENST00000451515 401 ntBASIC6.05□□□□□ -1.44
VARSP26640 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.05□□□□□ -1.44
VARSP26640 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
VARSP26640 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VARSP26640 AC010343.2-201ENST00000510162 224 ntBASIC6.05□□□□□ -1.44
VARSP26640 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.05□□□□□ -1.44
VARSP26640 RNA5SP400-201ENST00000517155 111 ntBASIC6.05□□□□□ -1.44
VARSP26640 AC109329.1-201ENST00000518744 317 ntBASIC6.05□□□□□ -1.44
VARSP26640 AC104576.1-201ENST00000524225 88 ntBASIC6.05□□□□□ -1.44
VARSP26640 DEFB108D-201ENST00000527787 222 ntBASIC6.05□□□□□ -1.44
VARSP26640 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.05□□□□□ -1.44
VARSP26640 AC009852.2-201ENST00000567898 485 ntBASIC6.05□□□□□ -1.44
VARSP26640 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.05□□□□□ -1.44
VARSP26640 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.05□□□□□ -1.44
VARSP26640 MIR4273-201ENST00000582824 84 ntBASIC6.05□□□□□ -1.44
VARSP26640 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.05□□□□□ -1.44
VARSP26640 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.05□□□□□ -1.44
VARSP26640 BX284668.6-201ENST00000606899 438 ntBASIC6.05□□□□□ -1.44
VARSP26640 AP001784.1-201ENST00000624107 428 ntBASIC6.05□□□□□ -1.44
VARSP26640 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.05□□□□□ -1.44
VARSP26640 AC116667.2-201ENST00000641075 823 ntBASIC6.05□□□□□ -1.44
VARSP26640 AC010329.2-201ENST00000595195 2737 ntBASIC6.05□□□□□ -1.44
VARSP26640 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARSP26640 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.05□□□□□ -1.44
VARSP26640 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
VARSP26640 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARSP26640 HSPA8P4-201ENST00000511877 1920 ntBASIC6.05□□□□□ -1.44
VARSP26640 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
VARSP26640 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.05□□□□□ -1.44
VARSP26640 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VARSP26640 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARSP26640 AC011933.2-201ENST00000578539 2790 ntBASIC6.04□□□□□ -1.44
VARSP26640 PWAR1-201ENST00000624188 2414 ntBASIC6.04□□□□□ -1.44
VARSP26640 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VARSP26640 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARSP26640 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VARSP26640 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARSP26640 Y_RNA.83-201ENST00000363005 113 ntBASIC6.04□□□□□ -1.44
VARSP26640 MIR215-201ENST00000384858 110 ntBASIC6.04□□□□□ -1.44
VARSP26640 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
VARSP26640 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.04□□□□□ -1.44
VARSP26640 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.04□□□□□ -1.44
VARSP26640 RPL23AP25-201ENST00000430973 463 ntBASIC6.04□□□□□ -1.44
VARSP26640 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.04□□□□□ -1.44
VARSP26640 AL353662.1-201ENST00000439099 327 ntBASIC6.04□□□□□ -1.44
VARSP26640 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.04□□□□□ -1.44
VARSP26640 RANP2-201ENST00000456833 229 ntBASIC6.04□□□□□ -1.44
VARSP26640 RPL7P49-201ENST00000471402 708 ntBASIC6.04□□□□□ -1.44
VARSP26640 AP002453.1-201ENST00000492327 668 ntBASIC6.04□□□□□ -1.44
VARSP26640 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.04□□□□□ -1.44
VARSP26640 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.04□□□□□ -1.44
VARSP26640 SNORA31.6-201ENST00000516241 130 ntBASIC6.04□□□□□ -1.44
VARSP26640 SNORA25.14-201ENST00000516481 132 ntBASIC6.04□□□□□ -1.44
VARSP26640 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.04□□□□□ -1.44
VARSP26640 AC139365.2-201ENST00000517972 253 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms