Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
XPAP23025 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
XPAP23025 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.71□□□□□ -1.65
XPAP23025 MFSD8-242ENST00000641690 4199 ntBASIC4.71□□□□□ -1.66
XPAP23025 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 CASC19-280ENST00000642102 1351 ntBASIC4.71□□□□□ -1.66
XPAP23025 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 AC079741.1-201ENST00000321498 212 ntBASIC4.71□□□□□ -1.66
XPAP23025 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 Y_RNA.38-201ENST00000362617 102 ntBASIC4.71□□□□□ -1.66
XPAP23025 RNU6-1085P-201ENST00000363576 107 ntBASIC4.71□□□□□ -1.66
XPAP23025 RNA5SP505-201ENST00000364748 108 ntBASIC4.71□□□□□ -1.66
XPAP23025 RNY4P16-201ENST00000364768 94 ntBASIC4.71□□□□□ -1.66
XPAP23025 RNU6-356P-201ENST00000384140 107 ntBASIC4.71□□□□□ -1.66
XPAP23025 MIR153-1-201ENST00000384914 90 ntBASIC4.71□□□□□ -1.66
XPAP23025 AC068050.1-201ENST00000394891 380 ntBASIC4.71□□□□□ -1.66
XPAP23025 AP000580.1-201ENST00000404439 358 ntBASIC4.71□□□□□ -1.66
XPAP23025 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.71□□□□□ -1.66
XPAP23025 EIF4HP2-201ENST00000424380 563 ntBASIC4.71□□□□□ -1.66
XPAP23025 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.71□□□□□ -1.66
XPAP23025 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.71□□□□□ -1.66
XPAP23025 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.71□□□□□ -1.66
XPAP23025 AL359265.2-201ENST00000434367 631 ntBASIC4.71□□□□□ -1.66
XPAP23025 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.71□□□□□ -1.66
XPAP23025 MTND5P20-201ENST00000448677 143 ntBASIC4.71□□□□□ -1.66
XPAP23025 AL162591.2-201ENST00000449634 317 ntBASIC4.71□□□□□ -1.66
XPAP23025 TPT1P13-201ENST00000449760 499 ntBASIC4.71□□□□□ -1.66
XPAP23025 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.71□□□□□ -1.66
XPAP23025 AL645939.1-201ENST00000453429 797 ntBASIC4.71□□□□□ -1.66
XPAP23025 AL513533.1-201ENST00000453728 415 ntBASIC4.71□□□□□ -1.66
XPAP23025 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
XPAP23025 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.71□□□□□ -1.66
XPAP23025 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.71□□□□□ -1.66
XPAP23025 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.71□□□□□ -1.66
XPAP23025 AC114781.4-201ENST00000513707 639 ntBASIC4.71□□□□□ -1.66
XPAP23025 RNU6-528P-201ENST00000516926 100 ntBASIC4.71□□□□□ -1.66
XPAP23025 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.71□□□□□ -1.66
XPAP23025 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.71□□□□□ -1.66
XPAP23025 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.71□□□□□ -1.66
XPAP23025 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.71□□□□□ -1.66
XPAP23025 ADI1P3-201ENST00000549509 470 ntBASIC4.71□□□□□ -1.66
XPAP23025 FKBP1BP1-201ENST00000553366 325 ntBASIC4.71□□□□□ -1.66
XPAP23025 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.71□□□□□ -1.66
XPAP23025 AC012417.1-201ENST00000582307 1039 ntBASIC4.71□□□□□ -1.66
XPAP23025 AC005730.3-201ENST00000583067 366 ntBASIC4.71□□□□□ -1.66
XPAP23025 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.71□□□□□ -1.66
XPAP23025 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.71□□□□□ -1.66
XPAP23025 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 AC007363.1-201ENST00000604736 620 ntBASIC4.71□□□□□ -1.66
XPAP23025 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.71□□□□□ -1.66
XPAP23025 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
XPAP23025 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.71□□□□□ -1.66
XPAP23025 AC005609.4-201ENST00000625071 447 ntBASIC4.71□□□□□ -1.66
XPAP23025 U3.53-201ENST00000628922 216 ntBASIC4.71□□□□□ -1.66
XPAP23025 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
XPAP23025 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
XPAP23025 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
XPAP23025 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.7□□□□□ -1.66
XPAP23025 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
XPAP23025 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
XPAP23025 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.7□□□□□ -1.66
XPAP23025 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
XPAP23025 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
XPAP23025 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
XPAP23025 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
XPAP23025 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.7□□□□□ -1.66
XPAP23025 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
XPAP23025 RNA5SP258-201ENST00000362750 119 ntBASIC4.7□□□□□ -1.66
XPAP23025 MT-TL1-201ENST00000386347 75 ntBASIC4.7□□□□□ -1.66
XPAP23025 RNU6-876P-201ENST00000391295 104 ntBASIC4.7□□□□□ -1.66
XPAP23025 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.7□□□□□ -1.66
XPAP23025 PSMA2P3-201ENST00000429685 675 ntBASIC4.7□□□□□ -1.66
XPAP23025 MTCO3P18-201ENST00000440206 761 ntBASIC4.7□□□□□ -1.66
XPAP23025 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.7□□□□□ -1.66
XPAP23025 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.7□□□□□ -1.66
XPAP23025 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.7□□□□□ -1.66
XPAP23025 RPL37P6-202ENST00000464216 403 ntBASIC4.7□□□□□ -1.66
XPAP23025 AC041039.1-201ENST00000485656 536 ntBASIC4.7□□□□□ -1.66
XPAP23025 RPL35P6-201ENST00000490024 372 ntBASIC4.7□□□□□ -1.66
XPAP23025 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.7□□□□□ -1.66
XPAP23025 MTCO3P44-201ENST00000510977 541 ntBASIC4.7□□□□□ -1.66
XPAP23025 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.7□□□□□ -1.66
XPAP23025 Y_RNA.702-201ENST00000516843 96 ntBASIC4.7□□□□□ -1.66
XPAP23025 RN7SKP277-201ENST00000516895 283 ntBASIC4.7□□□□□ -1.66
XPAP23025 RN7SKP92-201ENST00000517266 244 ntBASIC4.7□□□□□ -1.66
XPAP23025 IGKV2D-36-201ENST00000518643 226 ntBASIC4.7□□□□□ -1.66
XPAP23025 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.7□□□□□ -1.66
XPAP23025 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.7□□□□□ -1.66
XPAP23025 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.7□□□□□ -1.66
XPAP23025 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.7□□□□□ -1.66
XPAP23025 AP000907.2-201ENST00000530827 353 ntBASIC4.7□□□□□ -1.66
XPAP23025 AC022882.1-201ENST00000532142 501 ntBASIC4.7□□□□□ -1.66
XPAP23025 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.7□□□□□ -1.66
XPAP23025 SUB1P2-201ENST00000556401 297 ntBASIC4.7□□□□□ -1.66
XPAP23025 AC234771.5-201ENST00000600161 514 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms