Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NCK1P16333 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NCK1P16333 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NCK1P16333 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NCK1P16333 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NCK1P16333 RNU6-707P-201ENST00000364647 95 ntBASIC3.03□□□□□ -1.92
NCK1P16333 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
NCK1P16333 MCTS2P-201ENST00000394552 546 ntBASIC3.03□□□□□ -1.92
NCK1P16333 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AL024507.1-201ENST00000412741 274 ntBASIC3.03□□□□□ -1.92
NCK1P16333 USP9YP21-201ENST00000420603 432 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.03□□□□□ -1.92
NCK1P16333 AC073063.1-201ENST00000434352 607 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC004866.2-201ENST00000438285 481 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC009969.1-201ENST00000438726 172 ntBASIC3.03□□□□□ -1.92
NCK1P16333 RABEPKP1-201ENST00000440529 1026 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.03□□□□□ -1.92
NCK1P16333 NOTCH2P1-201ENST00000443481 624 ntBASIC3.03□□□□□ -1.92
NCK1P16333 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.03□□□□□ -1.92
NCK1P16333 UQCRHP3-201ENST00000451503 251 ntBASIC3.03□□□□□ -1.92
NCK1P16333 NUTF2P7-201ENST00000453086 375 ntBASIC3.03□□□□□ -1.92
NCK1P16333 SUMO2P2-201ENST00000456482 255 ntBASIC3.03□□□□□ -1.92
NCK1P16333 RPS23P3-201ENST00000470993 430 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AP002884.2-201ENST00000471647 395 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.03□□□□□ -1.92
NCK1P16333 RPL7P38-201ENST00000488396 739 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.03□□□□□ -1.92
NCK1P16333 AC006390.1-201ENST00000508068 283 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.03□□□□□ -1.92
NCK1P16333 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 RNA5SP380-201ENST00000517190 98 ntBASIC3.03□□□□□ -1.92
NCK1P16333 RNU6-1261P-201ENST00000517194 104 ntBASIC3.03□□□□□ -1.92
NCK1P16333 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.03□□□□□ -1.92
NCK1P16333 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 DEFB130C-202ENST00000530001 230 ntBASIC3.03□□□□□ -1.92
NCK1P16333 OR4P1P-201ENST00000530808 1136 ntBASIC3.03□□□□□ -1.92
NCK1P16333 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.03□□□□□ -1.92
NCK1P16333 AP005205.1-201ENST00000563503 508 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC023825.1-201ENST00000566704 1030 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.03□□□□□ -1.92
NCK1P16333 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.03□□□□□ -1.92
NCK1P16333 AC009220.3-201ENST00000604318 586 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC067959.1-201ENST00000604334 379 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AL583856.2-201ENST00000606298 543 ntBASIC3.03□□□□□ -1.92
NCK1P16333 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.03□□□□□ -1.92
NCK1P16333 AC024941.1-201ENST00000612250 334 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC068831.7-201ENST00000616954 363 ntBASIC3.03□□□□□ -1.92
NCK1P16333 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 AL356585.4-201ENST00000623078 1229 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC095031.1-201ENST00000623685 672 ntBASIC3.03□□□□□ -1.92
NCK1P16333 MKKS-204ENST00000639674 192 ntBASIC3.03□□□□□ -1.92
NCK1P16333 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NCK1P16333 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.03□□□□□ -1.92
NCK1P16333 MAPK10-322ENST00000641485 4530 ntBASIC3.03□□□□□ -1.92
NCK1P16333 AC103988.1-201ENST00000566382 2177 ntBASIC3.02□□□□□ -1.93
NCK1P16333 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
NCK1P16333 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.02□□□□□ -1.93
NCK1P16333 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NCK1P16333 Y_RNA.126-201ENST00000363382 111 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AL359837.1-201ENST00000381357 287 ntBASIC3.02□□□□□ -1.93
NCK1P16333 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.02□□□□□ -1.93
NCK1P16333 SNORA11-201ENST00000408789 128 ntBASIC3.02□□□□□ -1.93
NCK1P16333 RN7SKP111-201ENST00000410349 271 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AC092447.6-201ENST00000414578 210 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.02□□□□□ -1.93
NCK1P16333 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.02□□□□□ -1.93
NCK1P16333 PTP4A1P7-201ENST00000423476 514 ntBASIC3.02□□□□□ -1.93
NCK1P16333 UBE2D3P2-201ENST00000424409 445 ntBASIC3.02□□□□□ -1.93
NCK1P16333 HIGD1AP11-201ENST00000438361 280 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NCK1P16333 RPL26P28-201ENST00000451325 435 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.02□□□□□ -1.93
NCK1P16333 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.02□□□□□ -1.93
NCK1P16333 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NCK1P16333 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.02□□□□□ -1.93
NCK1P16333 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NCK1P16333 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.02□□□□□ -1.93
NCK1P16333 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.02□□□□□ -1.93
NCK1P16333 SNORD59.2-201ENST00000516873 68 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AP001189.2-201ENST00000527320 189 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.02□□□□□ -1.93
NCK1P16333 UBE2NP1-201ENST00000545592 458 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AC125611.1-201ENST00000549563 229 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.02□□□□□ -1.93
NCK1P16333 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.02□□□□□ -1.93
NCK1P16333 OR4T1P-201ENST00000554933 911 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.02□□□□□ -1.93
NCK1P16333 AC122134.1-202ENST00000569111 1201 ntBASIC3.02□□□□□ -1.93
NCK1P16333 FAM60BP-201ENST00000578364 658 ntBASIC3.02□□□□□ -1.93
NCK1P16333 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.02□□□□□ -1.93
NCK1P16333 AC016877.3-201ENST00000606778 504 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AP001521.1-201ENST00000609150 300 ntBASIC3.02□□□□□ -1.93
NCK1P16333 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.02□□□□□ -1.93
NCK1P16333 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms