Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC211433.2-201ENST00000608433 387 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 SNORD91B-202ENST00000608459 222 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.86□□□□□ -1.63
COL6A2P12110 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.86□□□□□ -1.63
COL6A2P12110 AL354950.2-201ENST00000617939 290 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AC019206.1-201ENST00000621938 425 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
COL6A2P12110 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 AL157700.1-201ENST00000561973 1432 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 AC009951.1-201ENST00000623674 2614 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 IQCB2P-201ENST00000401788 1633 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
COL6A2P12110 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COL6A2P12110 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.85□□□□□ -1.63
COL6A2P12110 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 OR1S2-201ENST00000302592 978 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COL6A2P12110 SNORA74A-201ENST00000364089 198 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 U3.29-201ENST00000391296 212 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.85□□□□□ -1.63
COL6A2P12110 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.85□□□□□ -1.63
COL6A2P12110 FABP7P1-201ENST00000424004 391 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.85□□□□□ -1.63
COL6A2P12110 RPS20P5-201ENST00000434808 360 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AL627308.1-201ENST00000435693 821 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 RPL21P89-201ENST00000444021 467 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AL163193.1-201ENST00000444895 788 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.85□□□□□ -1.63
COL6A2P12110 AC092647.2-201ENST00000452998 253 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 IFNWP4-201ENST00000453148 294 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AL389915.2-201ENST00000454576 441 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.85□□□□□ -1.63
COL6A2P12110 AC108751.2-201ENST00000469993 231 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AL163973.1-201ENST00000484753 577 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 RN7SL97P-201ENST00000486780 299 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.85□□□□□ -1.63
COL6A2P12110 AL139099.1-201ENST00000497398 403 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 MTCO3P9-201ENST00000506989 781 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.85□□□□□ -1.63
COL6A2P12110 AC105417.1-201ENST00000514691 285 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 IGLVIV-53-201ENST00000520107 367 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.85□□□□□ -1.63
COL6A2P12110 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.85□□□□□ -1.63
COL6A2P12110 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.85□□□□□ -1.63
COL6A2P12110 AC068831.4-201ENST00000556118 109 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.85□□□□□ -1.63
COL6A2P12110 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.85□□□□□ -1.63
COL6A2P12110 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.85□□□□□ -1.63
COL6A2P12110 MIR4716-201ENST00000579628 84 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 SNORA74C-1-201ENST00000580726 201 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.85□□□□□ -1.63
COL6A2P12110 AC025588.3-201ENST00000604182 274 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AC103710.2-201ENST00000609912 942 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AL132765.2-201ENST00000610812 351 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AC135507.2-201ENST00000612443 309 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 AC002550.2-201ENST00000621246 394 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.85□□□□□ -1.63
COL6A2P12110 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.85□□□□□ -1.63
COL6A2P12110 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
COL6A2P12110 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 AL356489.2-201ENST00000566968 3528 ntBASIC4.85□□□□□ -1.63
COL6A2P12110 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL6A2P12110 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
COL6A2P12110 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.85□□□□□ -1.63
COL6A2P12110 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL6A2P12110 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL6A2P12110 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.84□□□□□ -1.63
COL6A2P12110 RIOK3P1-201ENST00000418778 1528 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL6A2P12110 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COL6A2P12110 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL6A2P12110 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL6A2P12110 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL6A2P12110 SNORA51.2-201ENST00000364595 132 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 RNY3P13-201ENST00000365542 102 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 RNU4-48P-201ENST00000365559 182 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 MIR105-2-201ENST00000385083 81 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 AL356432.1-201ENST00000405809 419 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 RN7SKP32-201ENST00000410167 303 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 HMGN1P24-201ENST00000412282 298 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.84□□□□□ -1.63
COL6A2P12110 AL355433.1-201ENST00000422804 300 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms