Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.94□□□□□ -1.78
PCNAP12004 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.94□□□□□ -1.78
PCNAP12004 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.94□□□□□ -1.78
PCNAP12004 RNA5SP246-201ENST00000458909 119 ntBASIC3.94□□□□□ -1.78
PCNAP12004 SNRPGP3-201ENST00000469405 227 ntBASIC3.94□□□□□ -1.78
PCNAP12004 RN7SL481P-201ENST00000477764 299 ntBASIC3.94□□□□□ -1.78
PCNAP12004 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.94□□□□□ -1.78
PCNAP12004 AC091167.1-201ENST00000492017 396 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.94□□□□□ -1.78
PCNAP12004 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.94□□□□□ -1.78
PCNAP12004 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.94□□□□□ -1.78
PCNAP12004 AC093853.1-201ENST00000515689 483 ntBASIC3.94□□□□□ -1.78
PCNAP12004 RNU6-27P-201ENST00000516146 107 ntBASIC3.94□□□□□ -1.78
PCNAP12004 IGKV2-38-201ENST00000517443 247 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.94□□□□□ -1.78
PCNAP12004 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.94□□□□□ -1.78
PCNAP12004 OR5AP1P-201ENST00000529730 940 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AP004247.1-201ENST00000531556 1289 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.94□□□□□ -1.78
PCNAP12004 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.94□□□□□ -1.78
PCNAP12004 MTCYBP33-201ENST00000575007 1130 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC025627.2-201ENST00000576220 160 ntBASIC3.94□□□□□ -1.78
PCNAP12004 MIR4700-201ENST00000578311 74 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.94□□□□□ -1.78
PCNAP12004 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.94□□□□□ -1.78
PCNAP12004 MIR3138-201ENST00000585238 82 ntBASIC3.94□□□□□ -1.78
PCNAP12004 RSL24D1P11-201ENST00000591045 491 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.94□□□□□ -1.78
PCNAP12004 AC104662.1-201ENST00000604448 511 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC006065.5-201ENST00000623427 349 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC139792.2-201ENST00000624218 587 ntBASIC3.94□□□□□ -1.78
PCNAP12004 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.94□□□□□ -1.78
PCNAP12004 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.94□□□□□ -1.78
PCNAP12004 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.94□□□□□ -1.78
PCNAP12004 AL356473.1-201ENST00000406203 1408 ntBASIC3.94□□□□□ -1.78
PCNAP12004 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
PCNAP12004 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
PCNAP12004 GABPAP-201ENST00000419271 1356 ntBASIC3.93□□□□□ -1.78
PCNAP12004 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.93□□□□□ -1.78
PCNAP12004 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCNAP12004 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCNAP12004 SNORA56-201ENST00000383966 129 ntBASIC3.93□□□□□ -1.78
PCNAP12004 RNU6-761P-201ENST00000384148 107 ntBASIC3.93□□□□□ -1.78
PCNAP12004 U8.14-201ENST00000390843 143 ntBASIC3.93□□□□□ -1.78
PCNAP12004 OR6C69P-201ENST00000394268 893 ntBASIC3.93□□□□□ -1.78
PCNAP12004 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.93□□□□□ -1.78
PCNAP12004 FAR2P2-201ENST00000413041 594 ntBASIC3.93□□□□□ -1.78
PCNAP12004 MTATP6P27-201ENST00000416987 621 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.93□□□□□ -1.78
PCNAP12004 AL512649.1-201ENST00000428997 581 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.93□□□□□ -1.78
PCNAP12004 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.93□□□□□ -1.78
PCNAP12004 RSU1P2-202ENST00000437884 485 ntBASIC3.93□□□□□ -1.78
PCNAP12004 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PCNAP12004 AF228730.2-201ENST00000438784 848 ntBASIC3.93□□□□□ -1.78
PCNAP12004 NUTF2P3-201ENST00000448540 384 ntBASIC3.93□□□□□ -1.78
PCNAP12004 PAXBP1P1-201ENST00000449315 447 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.93□□□□□ -1.78
PCNAP12004 RPL38P1-201ENST00000460914 211 ntBASIC3.93□□□□□ -1.78
PCNAP12004 RPL7L1P8-201ENST00000469911 741 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AL049830.2-201ENST00000480072 201 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PCNAP12004 RN7SL604P-201ENST00000492589 296 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AC005921.1-201ENST00000510589 286 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.93□□□□□ -1.78
PCNAP12004 AC024589.1-201ENST00000512207 263 ntBASIC3.93□□□□□ -1.78
PCNAP12004 SNORA31.9-201ENST00000516429 84 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.93□□□□□ -1.78
PCNAP12004 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.93□□□□□ -1.78
PCNAP12004 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.93□□□□□ -1.78
PCNAP12004 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.93□□□□□ -1.78
PCNAP12004 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.93□□□□□ -1.78
PCNAP12004 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.93□□□□□ -1.78
PCNAP12004 CENPUP2-201ENST00000555897 1186 ntBASIC3.93□□□□□ -1.78
PCNAP12004 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.93□□□□□ -1.78
PCNAP12004 MIR5684-201ENST00000585074 65 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.93□□□□□ -1.78
PCNAP12004 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.93□□□□□ -1.78
PCNAP12004 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.93□□□□□ -1.78
PCNAP12004 AC073544.2-201ENST00000601155 540 ntBASIC3.93□□□□□ -1.78
PCNAP12004 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.93□□□□□ -1.78
PCNAP12004 RN7SKP299-201ENST00000606679 301 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AC006329.2-201ENST00000611491 394 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AC091925.2-201ENST00000625059 256 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
PCNAP12004 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
PCNAP12004 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PCNAP12004 MAPK10-373ENST00000641983 6772 ntBASIC3.93□□□□□ -1.78
PCNAP12004 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.93□□□□□ -1.78
PCNAP12004 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.93□□□□□ -1.78
PCNAP12004 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCNAP12004 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
PCNAP12004 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
PCNAP12004 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.92□□□□□ -1.78
PCNAP12004 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms