Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RARAP10276 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RARAP10276 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RARAP10276 TPTE2P4-201ENST00000258589 1605 ntBASIC5.66□□□□□ -1.5
RARAP10276 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RARAP10276 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.66□□□□□ -1.5
RARAP10276 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.66□□□□□ -1.5
RARAP10276 AC092079.1-201ENST00000558620 1985 ntBASIC5.66□□□□□ -1.5
RARAP10276 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 AL353796.1-201ENST00000561542 3241 ntBASIC5.66□□□□□ -1.5
RARAP10276 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RARAP10276 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RARAP10276 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
RARAP10276 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 RNA5SP435-201ENST00000364044 108 ntBASIC5.66□□□□□ -1.5
RARAP10276 Y_RNA.496-201ENST00000384444 101 ntBASIC5.66□□□□□ -1.5
RARAP10276 Y_RNA.556-201ENST00000384677 113 ntBASIC5.66□□□□□ -1.5
RARAP10276 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RARAP10276 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RARAP10276 RNU2-3P-201ENST00000410144 191 ntBASIC5.66□□□□□ -1.5
RARAP10276 AL031736.2-201ENST00000426573 787 ntBASIC5.66□□□□□ -1.5
RARAP10276 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.66□□□□□ -1.5
RARAP10276 RPL19P16-201ENST00000433839 588 ntBASIC5.66□□□□□ -1.5
RARAP10276 AL162388.1-201ENST00000450912 352 ntBASIC5.66□□□□□ -1.5
RARAP10276 AL353691.1-201ENST00000451332 387 ntBASIC5.66□□□□□ -1.5
RARAP10276 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.66□□□□□ -1.5
RARAP10276 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.66□□□□□ -1.5
RARAP10276 AC023424.1-201ENST00000496058 459 ntBASIC5.66□□□□□ -1.5
RARAP10276 HIGD1AP13-201ENST00000509878 289 ntBASIC5.66□□□□□ -1.5
RARAP10276 AC107222.1-201ENST00000510899 637 ntBASIC5.66□□□□□ -1.5
RARAP10276 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.66□□□□□ -1.5
RARAP10276 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.66□□□□□ -1.5
RARAP10276 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RARAP10276 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.66□□□□□ -1.5
RARAP10276 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.66□□□□□ -1.5
RARAP10276 PSMA6P4-201ENST00000603247 718 ntBASIC5.66□□□□□ -1.5
RARAP10276 AC005191.1-201ENST00000603950 358 ntBASIC5.66□□□□□ -1.5
RARAP10276 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.66□□□□□ -1.5
RARAP10276 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.66□□□□□ -1.5
RARAP10276 AC244107.2-201ENST00000611773 76 ntBASIC5.66□□□□□ -1.5
RARAP10276 MIR6729-201ENST00000618194 65 ntBASIC5.66□□□□□ -1.5
RARAP10276 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.66□□□□□ -1.5
RARAP10276 AL732372.2-225ENST00000642124 456 ntBASIC5.66□□□□□ -1.5
RARAP10276 AL034549.2-201ENST00000618285 3373 ntBASIC5.66□□□□□ -1.5
RARAP10276 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.66□□□□□ -1.5
RARAP10276 CDC27P3-201ENST00000635418 1910 ntBASIC5.66□□□□□ -1.5
RARAP10276 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RARAP10276 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RARAP10276 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RARAP10276 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RARAP10276 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.65□□□□□ -1.5
RARAP10276 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.65□□□□□ -1.5
RARAP10276 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.65□□□□□ -1.5
RARAP10276 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RARAP10276 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RARAP10276 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RARAP10276 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RARAP10276 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RARAP10276 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RARAP10276 RNU6-238P-201ENST00000363313 106 ntBASIC5.65□□□□□ -1.5
RARAP10276 RNU6-1243P-201ENST00000364028 107 ntBASIC5.65□□□□□ -1.5
RARAP10276 RNA5SP219-201ENST00000390940 113 ntBASIC5.65□□□□□ -1.5
RARAP10276 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.65□□□□□ -1.5
RARAP10276 SDHDP6-201ENST00000414693 480 ntBASIC5.65□□□□□ -1.5
RARAP10276 Z93019.1-201ENST00000416450 973 ntBASIC5.65□□□□□ -1.5
RARAP10276 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.65□□□□□ -1.5
RARAP10276 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.65□□□□□ -1.5
RARAP10276 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.65□□□□□ -1.5
RARAP10276 SUMO1P3-201ENST00000439961 304 ntBASIC5.65□□□□□ -1.5
RARAP10276 CYCSP51-201ENST00000443545 318 ntBASIC5.65□□□□□ -1.5
RARAP10276 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.65□□□□□ -1.5
RARAP10276 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.65□□□□□ -1.5
RARAP10276 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.65□□□□□ -1.5
RARAP10276 AC011411.1-201ENST00000509592 876 ntBASIC5.65□□□□□ -1.5
RARAP10276 AC098976.1-201ENST00000513014 541 ntBASIC5.65□□□□□ -1.5
RARAP10276 RNU6-388P-201ENST00000517012 105 ntBASIC5.65□□□□□ -1.5
RARAP10276 RNU6-389P-201ENST00000517048 105 ntBASIC5.65□□□□□ -1.5
RARAP10276 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RARAP10276 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.65□□□□□ -1.5
RARAP10276 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.65□□□□□ -1.5
RARAP10276 AL049779.2-201ENST00000553847 315 ntBASIC5.65□□□□□ -1.5
RARAP10276 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RARAP10276 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.65□□□□□ -1.5
RARAP10276 AC005341.1-201ENST00000571086 708 ntBASIC5.65□□□□□ -1.5
RARAP10276 MIR1273E-201ENST00000581165 102 ntBASIC5.65□□□□□ -1.5
RARAP10276 AC015982.1-201ENST00000608113 465 ntBASIC5.65□□□□□ -1.5
RARAP10276 RN7SL787P-201ENST00000613000 284 ntBASIC5.65□□□□□ -1.5
RARAP10276 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RARAP10276 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RARAP10276 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RARAP10276 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms