Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL356432.3-201ENST00000568952 465 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 MIR4277-201ENST00000578298 84 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AL512605.2-201ENST00000592972 256 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC009161.2-201ENST00000624626 138 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 ZNF652P1-201ENST00000442420 1309 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 RNU6-1120P-201ENST00000362988 108 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 Y_RNA.395-201ENST00000383945 109 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 RNU2-9P-201ENST00000410194 145 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 BX510359.2-201ENST00000417920 305 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 RPS15AP40-201ENST00000419621 391 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 PMCHL1-202ENST00000423102 261 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AL356276.2-201ENST00000435919 558 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AL049734.2-201ENST00000441066 616 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 PPP1R2P5-201ENST00000457256 603 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 EIF4EP3-201ENST00000498782 656 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC098976.1-201ENST00000513014 541 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC012339.2-201ENST00000523996 453 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 SUB1P1-201ENST00000524415 382 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AP000907.2-201ENST00000530827 353 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 TVP23CP2-201ENST00000571473 623 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC136624.4-201ENST00000573044 370 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 MIR3167-201ENST00000579623 85 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC011477.5-201ENST00000586571 259 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 POLR3GP2-201ENST00000588366 668 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC025588.3-201ENST00000604182 274 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 CTHRC1P1-201ENST00000605383 469 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AL391813.2-201ENST00000609113 322 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AL596245.1-201ENST00000618994 362 ntBASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CSB-PGBD3P0DP91 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AL590240.1-201ENST00000334118 313 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AC067945.1-201ENST00000342609 618 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 RNA5SP258-201ENST00000362750 119 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 RNU6-97P-201ENST00000363387 104 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 RNU6-146P-201ENST00000384602 108 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 MTCYBP9-201ENST00000431021 303 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AC119618.1-201ENST00000434191 222 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AL731563.1-201ENST00000442202 214 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 PTP4A1P4-201ENST00000512479 322 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 RN7SKP67-201ENST00000515905 235 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AC068993.1-201ENST00000546724 589 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AL117187.1-201ENST00000555482 181 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 MIR4715-201ENST00000584117 79 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 DPPA3P3-201ENST00000603842 430 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms