Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.36□□□□□ -2.19
APOBP04114 AC080013.2-201ENST00000460866 323 ntBASIC1.36□□□□□ -2.19
APOBP04114 AC006116.7-201ENST00000590141 756 ntBASIC1.36□□□□□ -2.19
APOBP04114 Z99496.1-201ENST00000469424 1477 ntBASIC1.36□□□□□ -2.19
APOBP04114 Y_RNA.112-201ENST00000363250 102 ntBASIC1.35□□□□□ -2.19
APOBP04114 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.35□□□□□ -2.19
APOBP04114 AL049830.2-201ENST00000480072 201 ntBASIC1.35□□□□□ -2.19
APOBP04114 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
APOBP04114 SCARNA16.3-201ENST00000516595 184 ntBASIC1.35□□□□□ -2.19
APOBP04114 RNA5SP480-201ENST00000516840 109 ntBASIC1.35□□□□□ -2.19
APOBP04114 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
APOBP04114 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
APOBP04114 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
APOBP04114 MIR142-201ENST00000384835 87 ntBASIC1.35□□□□□ -2.19
APOBP04114 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
APOBP04114 AL513175.2-201ENST00000422071 443 ntBASIC1.35□□□□□ -2.19
APOBP04114 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.35□□□□□ -2.19
APOBP04114 RN7SKP96-201ENST00000516948 297 ntBASIC1.35□□□□□ -2.19
APOBP04114 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC1.35□□□□□ -2.19
APOBP04114 RFPL1S-203ENST00000539579 330 ntBASIC1.35□□□□□ -2.19
APOBP04114 AP001542.2-201ENST00000593141 364 ntBASIC1.35□□□□□ -2.19
APOBP04114 BMS1P7-201ENST00000602440 1052 ntBASIC1.35□□□□□ -2.19
APOBP04114 AL645944.1-201ENST00000603857 493 ntBASIC1.35□□□□□ -2.19
APOBP04114 LINC00216-201ENST00000623548 1126 ntBASIC1.35□□□□□ -2.19
APOBP04114 AC091953.2-201ENST00000623979 160 ntBASIC1.35□□□□□ -2.19
APOBP04114 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.35□□□□□ -2.19
APOBP04114 AC009487.2-201ENST00000420969 6821 ntBASIC1.35□□□□□ -2.19
APOBP04114 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
APOBP04114 RNU1-138P-201ENST00000384093 164 ntBASIC1.35□□□□□ -2.19
APOBP04114 AC013410.1-201ENST00000436223 1232 ntBASIC1.35□□□□□ -2.19
APOBP04114 GAPDHP27-201ENST00000447427 1020 ntBASIC1.35□□□□□ -2.19
APOBP04114 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.35□□□□□ -2.19
APOBP04114 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.35□□□□□ -2.19
APOBP04114 MIR5002-201ENST00000584713 97 ntBASIC1.35□□□□□ -2.19
APOBP04114 AL589994.2-201ENST00000621124 579 ntBASIC1.35□□□□□ -2.19
APOBP04114 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC1.35□□□□□ -2.19
APOBP04114 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.35□□□□□ -2.19
APOBP04114 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.35□□□□□ -2.19
APOBP04114 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
APOBP04114 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.35□□□□□ -2.19
APOBP04114 AC009238.1-201ENST00000442165 424 ntBASIC1.35□□□□□ -2.19
APOBP04114 AC009237.6-201ENST00000446969 424 ntBASIC1.35□□□□□ -2.19
APOBP04114 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.35□□□□□ -2.19
APOBP04114 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
APOBP04114 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.34□□□□□ -2.19
APOBP04114 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.34□□□□□ -2.19
APOBP04114 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
APOBP04114 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.34□□□□□ -2.19
APOBP04114 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
APOBP04114 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.34□□□□□ -2.19
APOBP04114 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.34□□□□□ -2.19
APOBP04114 AC104389.3-201ENST00000445629 235 ntBASIC1.34□□□□□ -2.19
APOBP04114 AL162388.1-201ENST00000450912 352 ntBASIC1.34□□□□□ -2.19
APOBP04114 RNA5SP182-201ENST00000516064 82 ntBASIC1.34□□□□□ -2.19
APOBP04114 AGGF1P8-201ENST00000562979 1000 ntBASIC1.34□□□□□ -2.19
APOBP04114 MIR6779-201ENST00000617283 64 ntBASIC1.34□□□□□ -2.19
APOBP04114 Z99129.2-201ENST00000619967 314 ntBASIC1.34□□□□□ -2.19
APOBP04114 AL109809.4-201ENST00000603520 2185 ntBASIC1.34□□□□□ -2.19
APOBP04114 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.34□□□□□ -2.19
APOBP04114 MTND5P23-201ENST00000430812 1655 ntBASIC1.34□□□□□ -2.19
APOBP04114 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
APOBP04114 MIR3074-201ENST00000384885 81 ntBASIC1.34□□□□□ -2.19
APOBP04114 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.19
APOBP04114 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
APOBP04114 CR769767.1-201ENST00000436337 346 ntBASIC1.34□□□□□ -2.19
APOBP04114 AL445669.2-201ENST00000454425 421 ntBASIC1.34□□□□□ -2.19
APOBP04114 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.34□□□□□ -2.19
APOBP04114 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
APOBP04114 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.34□□□□□ -2.19
APOBP04114 OR4P1P-201ENST00000530808 1136 ntBASIC1.34□□□□□ -2.19
APOBP04114 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.34□□□□□ -2.19
APOBP04114 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
APOBP04114 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
APOBP04114 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
APOBP04114 ZNF355P-201ENST00000427301 3216 ntBASIC1.34□□□□□ -2.19
APOBP04114 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
APOBP04114 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
APOBP04114 FGF7P8-201ENST00000402994 292 ntBASIC1.34□□□□□ -2.2
APOBP04114 SNORA11.4-201ENST00000408823 129 ntBASIC1.34□□□□□ -2.2
APOBP04114 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.34□□□□□ -2.2
APOBP04114 RPS15AP12-201ENST00000419498 388 ntBASIC1.34□□□□□ -2.2
APOBP04114 AL450263.2-201ENST00000439400 589 ntBASIC1.34□□□□□ -2.2
APOBP04114 RPL23AP76-201ENST00000441860 458 ntBASIC1.34□□□□□ -2.2
APOBP04114 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.34□□□□□ -2.2
APOBP04114 SNORD13-201ENST00000459299 104 ntBASIC1.34□□□□□ -2.2
APOBP04114 MTAPP1-201ENST00000489154 819 ntBASIC1.34□□□□□ -2.2
APOBP04114 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.34□□□□□ -2.2
APOBP04114 AC008126.1-201ENST00000549019 480 ntBASIC1.34□□□□□ -2.2
APOBP04114 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.34□□□□□ -2.2
APOBP04114 RPP40P2-201ENST00000603596 712 ntBASIC1.34□□□□□ -2.2
APOBP04114 AC004520.1-201ENST00000608362 1413 ntBASIC1.34□□□□□ -2.2
APOBP04114 PNPT1P2-201ENST00000456768 2050 ntBASIC1.34□□□□□ -2.2
APOBP04114 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.33□□□□□ -2.2
APOBP04114 Z73417.1-201ENST00000447373 778 ntBASIC1.33□□□□□ -2.2
APOBP04114 RPL38P4-201ENST00000502376 214 ntBASIC1.33□□□□□ -2.2
APOBP04114 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.33□□□□□ -2.2
APOBP04114 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.33□□□□□ -2.2
APOBP04114 TMEM248P1-201ENST00000510579 951 ntBASIC1.33□□□□□ -2.2
APOBP04114 AC092436.3-201ENST00000511788 257 ntBASIC1.33□□□□□ -2.2
APOBP04114 SNORA70.14-201ENST00000516205 110 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms