Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MTND4P8-201ENST00000514997 1362 ntBASIC2.87□□□□□ -1.95
APOEP02649 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
APOEP02649 OR5J1P-201ENST00000313544 939 ntBASIC2.87□□□□□ -1.95
APOEP02649 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.87□□□□□ -1.95
APOEP02649 RNU6-263P-201ENST00000363811 107 ntBASIC2.87□□□□□ -1.95
APOEP02649 RNU6-1181P-201ENST00000384191 106 ntBASIC2.87□□□□□ -1.95
APOEP02649 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOEP02649 AL122016.1-201ENST00000403365 367 ntBASIC2.87□□□□□ -1.95
APOEP02649 AL139095.1-201ENST00000404326 391 ntBASIC2.87□□□□□ -1.95
APOEP02649 AL591034.1-201ENST00000407447 340 ntBASIC2.87□□□□□ -1.95
APOEP02649 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.87□□□□□ -1.95
APOEP02649 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
APOEP02649 FO393419.3-201ENST00000428741 282 ntBASIC2.87□□□□□ -1.95
APOEP02649 RPL23AP58-201ENST00000440453 469 ntBASIC2.87□□□□□ -1.95
APOEP02649 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOEP02649 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.87□□□□□ -1.95
APOEP02649 AC003982.1-202ENST00000469928 248 ntBASIC2.87□□□□□ -1.95
APOEP02649 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOEP02649 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.87□□□□□ -1.95
APOEP02649 MTND5P4-201ENST00000514978 288 ntBASIC2.87□□□□□ -1.95
APOEP02649 RNU1-61P-201ENST00000516107 151 ntBASIC2.87□□□□□ -1.95
APOEP02649 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
APOEP02649 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.87□□□□□ -1.95
APOEP02649 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOEP02649 AC090695.1-201ENST00000561269 1222 ntBASIC2.87□□□□□ -1.95
APOEP02649 AC009268.1-201ENST00000561352 1203 ntBASIC2.87□□□□□ -1.95
APOEP02649 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.87□□□□□ -1.95
APOEP02649 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.87□□□□□ -1.95
APOEP02649 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.87□□□□□ -1.95
APOEP02649 SNORD84-203ENST00000584275 78 ntBASIC2.87□□□□□ -1.95
APOEP02649 AL033523.1-201ENST00000605153 153 ntBASIC2.87□□□□□ -1.95
APOEP02649 AC008277.2-201ENST00000605196 797 ntBASIC2.87□□□□□ -1.95
APOEP02649 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.87□□□□□ -1.95
APOEP02649 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.87□□□□□ -1.95
APOEP02649 AP003122.5-201ENST00000527668 3766 ntBASIC2.86□□□□□ -1.95
APOEP02649 AC016716.1-201ENST00000265882 708 ntBASIC2.86□□□□□ -1.95
APOEP02649 SNORA5B-201ENST00000363786 132 ntBASIC2.86□□□□□ -1.95
APOEP02649 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.86□□□□□ -1.95
APOEP02649 AL592148.1-201ENST00000413568 445 ntBASIC2.86□□□□□ -1.95
APOEP02649 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.86□□□□□ -1.95
APOEP02649 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.86□□□□□ -1.95
APOEP02649 RPS6P14-201ENST00000425165 719 ntBASIC2.86□□□□□ -1.95
APOEP02649 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.86□□□□□ -1.95
APOEP02649 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.86□□□□□ -1.95
APOEP02649 MUPP-201ENST00000438111 566 ntBASIC2.86□□□□□ -1.95
APOEP02649 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.86□□□□□ -1.95
APOEP02649 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.86□□□□□ -1.95
APOEP02649 AP001486.1-201ENST00000463339 476 ntBASIC2.86□□□□□ -1.95
APOEP02649 AC087879.1-201ENST00000474343 374 ntBASIC2.86□□□□□ -1.95
APOEP02649 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.86□□□□□ -1.95
APOEP02649 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.86□□□□□ -1.95
APOEP02649 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.86□□□□□ -1.95
APOEP02649 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
APOEP02649 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.86□□□□□ -1.95
APOEP02649 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.86□□□□□ -1.95
APOEP02649 MIR3605-201ENST00000583214 100 ntBASIC2.86□□□□□ -1.95
APOEP02649 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.86□□□□□ -1.95
APOEP02649 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.86□□□□□ -1.95
APOEP02649 OR4G1P-201ENST00000588632 938 ntBASIC2.86□□□□□ -1.95
APOEP02649 MTCO3P22-201ENST00000603219 784 ntBASIC2.86□□□□□ -1.95
APOEP02649 AC007619.2-201ENST00000605743 379 ntBASIC2.86□□□□□ -1.95
APOEP02649 AC068831.7-201ENST00000616954 363 ntBASIC2.86□□□□□ -1.95
APOEP02649 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.86□□□□□ -1.95
APOEP02649 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.86□□□□□ -1.95
APOEP02649 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.86□□□□□ -1.95
APOEP02649 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOEP02649 SAGE4P-201ENST00000442271 3381 ntBASIC2.86□□□□□ -1.95
APOEP02649 Z82195.2-201ENST00000612348 18351 ntBASIC2.85□□□□□ -1.95
APOEP02649 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOEP02649 SNORD56.5-201ENST00000364281 72 ntBASIC2.85□□□□□ -1.95
APOEP02649 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOEP02649 MIR634-201ENST00000385208 97 ntBASIC2.85□□□□□ -1.95
APOEP02649 MIR1250-201ENST00000408098 113 ntBASIC2.85□□□□□ -1.95
APOEP02649 RNA5SP21-201ENST00000410917 96 ntBASIC2.85□□□□□ -1.95
APOEP02649 AC073264.1-201ENST00000411508 416 ntBASIC2.85□□□□□ -1.95
APOEP02649 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.85□□□□□ -1.95
APOEP02649 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.85□□□□□ -1.95
APOEP02649 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.85□□□□□ -1.95
APOEP02649 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.85□□□□□ -1.95
APOEP02649 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.85□□□□□ -1.95
APOEP02649 UBBP3-201ENST00000445497 241 ntBASIC2.85□□□□□ -1.95
APOEP02649 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.85□□□□□ -1.95
APOEP02649 AL035407.2-201ENST00000454090 378 ntBASIC2.85□□□□□ -1.95
APOEP02649 AL049873.1-201ENST00000480540 376 ntBASIC2.85□□□□□ -1.95
APOEP02649 AC103975.1-201ENST00000482506 483 ntBASIC2.85□□□□□ -1.95
APOEP02649 RN7SL297P-201ENST00000483161 293 ntBASIC2.85□□□□□ -1.95
APOEP02649 RPL9P33-201ENST00000484311 566 ntBASIC2.85□□□□□ -1.95
APOEP02649 AIG1P1-201ENST00000503376 148 ntBASIC2.85□□□□□ -1.95
APOEP02649 VN1R104P-201ENST00000505115 1009 ntBASIC2.85□□□□□ -1.95
APOEP02649 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.85□□□□□ -1.95
APOEP02649 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.85□□□□□ -1.95
APOEP02649 MTCO3P42-201ENST00000509488 518 ntBASIC2.85□□□□□ -1.95
APOEP02649 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOEP02649 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.85□□□□□ -1.95
APOEP02649 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.85□□□□□ -1.95
APOEP02649 MTCO3P39-201ENST00000514812 518 ntBASIC2.85□□□□□ -1.95
APOEP02649 SNORA31.20-201ENST00000517111 133 ntBASIC2.85□□□□□ -1.95
APOEP02649 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.85□□□□□ -1.95
APOEP02649 ATP1B3P1-201ENST00000605365 821 ntBASIC2.85□□□□□ -1.95
APOEP02649 AL137246.1-201ENST00000607072 977 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms