Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC011477.1-204ENST00000623416 1325 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC117529.2-201ENST00000512159 2068 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC021755.1-201ENST00000559747 1447 ntBASIC3.59□□□□□ -1.84
CLPTM1O96005 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.84
CLPTM1O96005 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLPTM1O96005 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
CLPTM1O96005 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.59□□□□□ -1.84
CLPTM1O96005 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CLPTM1O96005 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLPTM1O96005 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLPTM1O96005 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CLPTM1O96005 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLPTM1O96005 RNA5SP295-201ENST00000362655 121 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 RNU6-374P-201ENST00000364146 108 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLPTM1O96005 EI24P2-201ENST00000397776 1076 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AL136116.1-201ENST00000403591 381 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 MTCYBP38-201ENST00000417160 1123 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AIMP1P1-201ENST00000418670 937 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 MORF4L1P6-201ENST00000418771 268 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.58□□□□□ -1.84
CLPTM1O96005 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.58□□□□□ -1.84
CLPTM1O96005 NEK4P1-201ENST00000433383 879 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AC129850.1-201ENST00000436203 508 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC092427.1-201ENST00000439177 601 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 RPL29P29-201ENST00000448725 423 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.58□□□□□ -1.84
CLPTM1O96005 TRGVB-201ENST00000453257 471 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AC103987.1-201ENST00000473394 348 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC087879.1-201ENST00000474343 374 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.58□□□□□ -1.84
CLPTM1O96005 RPS3AP50-201ENST00000487064 803 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 OR2A20P-203ENST00000498397 1268 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.58□□□□□ -1.84
CLPTM1O96005 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CLPTM1O96005 RNU6-583P-201ENST00000516012 92 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.58□□□□□ -1.84
CLPTM1O96005 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AC011602.1-201ENST00000546484 331 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.58□□□□□ -1.84
CLPTM1O96005 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.58□□□□□ -1.84
CLPTM1O96005 SULT1C2P1-202ENST00000562418 459 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC025627.2-201ENST00000576220 160 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AF131215.7-201ENST00000602443 707 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC011468.4-201ENST00000603942 409 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AL591034.3-201ENST00000605511 685 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC008443.7-201ENST00000622195 246 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC073073.2-201ENST00000609827 2578 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.58□□□□□ -1.84
CLPTM1O96005 AP002001.2-201ENST00000529025 1469 ntBASIC3.58□□□□□ -1.84
CLPTM1O96005 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLPTM1O96005 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.57□□□□□ -1.84
CLPTM1O96005 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.57□□□□□ -1.84
CLPTM1O96005 RNU6-660P-201ENST00000364566 109 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 Y_RNA.436-201ENST00000384097 102 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 MIR649-201ENST00000384843 97 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 MIR607-201ENST00000385241 96 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 MT-TH-201ENST00000387441 69 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLPTM1O96005 SNORA26.8-201ENST00000391306 124 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLPTM1O96005 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CLPTM1O96005 RNU6-55P-201ENST00000411092 107 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 RNU6-954P-201ENST00000411355 107 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 BTF3L4P1-201ENST00000413813 468 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 ZNF833P-201ENST00000424938 1494 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 AC004975.1-201ENST00000428733 208 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.57□□□□□ -1.84
CLPTM1O96005 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.57□□□□□ -1.84
CLPTM1O96005 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.57□□□□□ -1.84
CLPTM1O96005 VN1R10P-201ENST00000447106 875 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.57□□□□□ -1.84
CLPTM1O96005 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.57□□□□□ -1.84
CLPTM1O96005 RPL26P28-201ENST00000451325 435 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.57□□□□□ -1.84
CLPTM1O96005 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.57□□□□□ -1.84
CLPTM1O96005 ZNF114P1-201ENST00000453500 292 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 RPS7P7-201ENST00000463499 571 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 AC010401.1-201ENST00000463867 348 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 AC087312.1-201ENST00000471411 480 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.57□□□□□ -1.84
CLPTM1O96005 AC010301.1-201ENST00000473936 355 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.57□□□□□ -1.84
CLPTM1O96005 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLPTM1O96005 AC090071.1-201ENST00000507713 644 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.57□□□□□ -1.84
CLPTM1O96005 MTCYBP37-201ENST00000510642 1133 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.57□□□□□ -1.84
CLPTM1O96005 MTCO1P35-201ENST00000515270 228 ntBASIC3.57□□□□□ -1.84
CLPTM1O96005 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms