Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.15□□□□□ -1.91
HCN1O60741 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.15□□□□□ -1.91
HCN1O60741 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.15□□□□□ -1.91
HCN1O60741 MTCYBP42-201ENST00000444653 1130 ntBASIC3.15□□□□□ -1.91
HCN1O60741 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 AC007967.1-201ENST00000455422 1159 ntBASIC3.15□□□□□ -1.91
HCN1O60741 snoU13.3-201ENST00000459441 104 ntBASIC3.15□□□□□ -1.91
HCN1O60741 RN7SL807P-201ENST00000470923 297 ntBASIC3.15□□□□□ -1.91
HCN1O60741 HMGN2P13-201ENST00000476476 274 ntBASIC3.15□□□□□ -1.91
HCN1O60741 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
HCN1O60741 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.15□□□□□ -1.91
HCN1O60741 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.15□□□□□ -1.91
HCN1O60741 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.15□□□□□ -1.91
HCN1O60741 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.15□□□□□ -1.91
HCN1O60741 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 AC104027.1-201ENST00000521887 300 ntBASIC3.15□□□□□ -1.91
HCN1O60741 AP001317.1-201ENST00000531194 960 ntBASIC3.15□□□□□ -1.91
HCN1O60741 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.15□□□□□ -1.91
HCN1O60741 LSM6P2-201ENST00000552208 177 ntBASIC3.15□□□□□ -1.91
HCN1O60741 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.15□□□□□ -1.91
HCN1O60741 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.15□□□□□ -1.91
HCN1O60741 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.15□□□□□ -1.91
HCN1O60741 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 AL031985.2-201ENST00000600955 480 ntBASIC3.15□□□□□ -1.91
HCN1O60741 AL161756.2-201ENST00000604597 246 ntBASIC3.15□□□□□ -1.91
HCN1O60741 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.15□□□□□ -1.91
HCN1O60741 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 AF129408.1-201ENST00000608767 431 ntBASIC3.15□□□□□ -1.91
HCN1O60741 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 AC004808.1-201ENST00000627671 721 ntBASIC3.15□□□□□ -1.91
HCN1O60741 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HCN1O60741 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.15□□□□□ -1.91
HCN1O60741 AC110774.1-201ENST00000623567 2018 ntBASIC3.15□□□□□ -1.91
HCN1O60741 MTND4P9-201ENST00000507819 1346 ntBASIC3.15□□□□□ -1.91
HCN1O60741 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HCN1O60741 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
HCN1O60741 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 SRP72P2-201ENST00000344851 1979 ntBASIC3.14□□□□□ -1.91
HCN1O60741 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN1O60741 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN1O60741 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN1O60741 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN1O60741 AC017071.1-201ENST00000564407 2204 ntBASIC3.14□□□□□ -1.91
HCN1O60741 HMGB1P5-201ENST00000255320 642 ntBASIC3.14□□□□□ -1.91
HCN1O60741 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HCN1O60741 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN1O60741 ANKRD36P1-201ENST00000344424 659 ntBASIC3.14□□□□□ -1.91
HCN1O60741 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
HCN1O60741 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.14□□□□□ -1.91
HCN1O60741 RNU6-339P-201ENST00000384310 107 ntBASIC3.14□□□□□ -1.91
HCN1O60741 RNU1-101P-201ENST00000391171 127 ntBASIC3.14□□□□□ -1.91
HCN1O60741 MTCO1P56-201ENST00000401674 224 ntBASIC3.14□□□□□ -1.91
HCN1O60741 AL079342.2-201ENST00000403367 482 ntBASIC3.14□□□□□ -1.91
HCN1O60741 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
HCN1O60741 RNA5SP56-201ENST00000410277 118 ntBASIC3.14□□□□□ -1.91
HCN1O60741 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN1O60741 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN1O60741 OR1AA1P-201ENST00000419597 916 ntBASIC3.14□□□□□ -1.91
HCN1O60741 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.14□□□□□ -1.91
HCN1O60741 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN1O60741 TRIAP1P1-201ENST00000427062 225 ntBASIC3.14□□□□□ -1.91
HCN1O60741 RAC1P8-201ENST00000427086 527 ntBASIC3.14□□□□□ -1.91
HCN1O60741 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN1O60741 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN1O60741 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.14□□□□□ -1.91
HCN1O60741 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN1O60741 RPL21P8-201ENST00000465083 535 ntBASIC3.14□□□□□ -1.91
HCN1O60741 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.14□□□□□ -1.91
HCN1O60741 OR5H5P-201ENST00000503164 928 ntBASIC3.14□□□□□ -1.91
HCN1O60741 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN1O60741 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN1O60741 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
HCN1O60741 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HCN1O60741 AC118942.1-201ENST00000529674 1035 ntBASIC3.14□□□□□ -1.91
HCN1O60741 DEFB130C-202ENST00000530001 230 ntBASIC3.14□□□□□ -1.91
HCN1O60741 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN1O60741 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.14□□□□□ -1.91
HCN1O60741 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HCN1O60741 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN1O60741 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN1O60741 MIR5708-201ENST00000579723 85 ntBASIC3.14□□□□□ -1.91
HCN1O60741 MIR5195-201ENST00000583555 115 ntBASIC3.14□□□□□ -1.91
HCN1O60741 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN1O60741 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN1O60741 AL022067.1-201ENST00000602426 454 ntBASIC3.14□□□□□ -1.91
HCN1O60741 AL513477.2-201ENST00000607858 568 ntBASIC3.14□□□□□ -1.91
HCN1O60741 VIS1.1-201ENST00000610517 203 ntBASIC3.14□□□□□ -1.91
HCN1O60741 AL512506.2-201ENST00000624472 458 ntBASIC3.14□□□□□ -1.91
HCN1O60741 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN1O60741 AC099654.8-201ENST00000637757 681 ntBASIC3.14□□□□□ -1.91
HCN1O60741 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.14□□□□□ -1.91
HCN1O60741 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN1O60741 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
HCN1O60741 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN1O60741 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.14□□□□□ -1.91
HCN1O60741 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms