Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 API5P2-201ENST00000397055 1498 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHMP2AO43633 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHMP2AO43633 AC116096.1-201ENST00000566804 2314 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHMP2AO43633 RNU1-35P-201ENST00000362782 153 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 RNU6-1339P-201ENST00000363574 91 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHMP2AO43633 PAICSP7-201ENST00000419829 962 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AL645937.1-202ENST00000421799 937 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CHMP2AO43633 DPPA2P1-201ENST00000428060 556 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AC087499.2-201ENST00000432861 149 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.18□□□□□ -1.9
CHMP2AO43633 RPS24P13-201ENST00000442520 397 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.18□□□□□ -1.9
CHMP2AO43633 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.18□□□□□ -1.9
CHMP2AO43633 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.18□□□□□ -1.9
CHMP2AO43633 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.18□□□□□ -1.9
CHMP2AO43633 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.18□□□□□ -1.9
CHMP2AO43633 RNU6-488P-201ENST00000515918 99 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 RN7SKP132-201ENST00000516001 208 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.18□□□□□ -1.9
CHMP2AO43633 AC079600.2-201ENST00000550076 130 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 GTF3AP2-201ENST00000557014 266 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.18□□□□□ -1.9
CHMP2AO43633 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.18□□□□□ -1.9
CHMP2AO43633 AC012254.4-201ENST00000588843 273 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AC092474.3-201ENST00000603022 568 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AC013468.1-201ENST00000608680 598 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AC003001.2-201ENST00000616294 831 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AL162233.1-201ENST00000620014 944 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 AP003400.6-201ENST00000624698 740 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHMP2AO43633 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHMP2AO43633 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.17□□□□□ -1.9
CHMP2AO43633 OR5J1P-201ENST00000313544 939 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 SNORA5B-201ENST00000363786 132 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 RNA5SP27-201ENST00000363839 119 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 RNU6-339P-201ENST00000384310 107 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 MIR181A2-201ENST00000384863 110 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 MIR512-1-201ENST00000384913 84 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 RPL31P1-201ENST00000398116 372 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 RPS3AP9-201ENST00000417027 792 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 UBE2D3P2-201ENST00000424409 445 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP2AO43633 AC105272.1-201ENST00000438604 198 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.17□□□□□ -1.9
CHMP2AO43633 RPL23AP23-201ENST00000452590 471 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.17□□□□□ -1.9
CHMP2AO43633 MTND2P6-201ENST00000455337 1030 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP2AO43633 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.17□□□□□ -1.9
CHMP2AO43633 RPS23P3-201ENST00000470993 430 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHMP2AO43633 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP2AO43633 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP2AO43633 COX6CP8-201ENST00000522620 226 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP2AO43633 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.17□□□□□ -1.9
CHMP2AO43633 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP2AO43633 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.17□□□□□ -1.9
CHMP2AO43633 AL020991.1-201ENST00000612314 373 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.17□□□□□ -1.9
CHMP2AO43633 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHMP2AO43633 AP002907.1-201ENST00000606361 1430 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHMP2AO43633 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHMP2AO43633 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHMP2AO43633 AL355578.1-201ENST00000607405 1328 ntBASIC3.17□□□□□ -1.9
CHMP2AO43633 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHMP2AO43633 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHMP2AO43633 FAM35CP-201ENST00000554755 2470 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHMP2AO43633 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.16□□□□□ -1.9
CHMP2AO43633 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.16□□□□□ -1.9
CHMP2AO43633 MTND3P20-201ENST00000407663 186 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 RPS27P5-201ENST00000444247 244 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP2AO43633 AC108729.2-201ENST00000476543 840 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 AC093663.2-201ENST00000484625 313 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 AC104057.1-201ENST00000515547 497 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP2AO43633 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP2AO43633 OR4H12P-201ENST00000556269 907 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.16□□□□□ -1.9
CHMP2AO43633 COX6CP3-201ENST00000580869 223 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 MAGOH2P-202ENST00000584384 429 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 AC083760.1-201ENST00000589621 670 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 AC008962.1-201ENST00000605729 304 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 AC021851.1-201ENST00000608537 1082 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 AC018755.4-201ENST00000619715 454 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.16□□□□□ -1.9
CHMP2AO43633 AC090897.3-201ENST00000636973 1157 ntBASIC3.16□□□□□ -1.9
CHMP2AO43633 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHMP2AO43633 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHMP2AO43633 MTCO1P18-201ENST00000455518 1419 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms