Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.56□□□□□ -2
UBFD1O14562 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.55□□□□□ -2
UBFD1O14562 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
UBFD1O14562 RNU4-31P-201ENST00000384211 141 ntBASIC2.55□□□□□ -2
UBFD1O14562 MIR1303-201ENST00000408625 86 ntBASIC2.55□□□□□ -2
UBFD1O14562 RNA5SP80-201ENST00000410475 111 ntBASIC2.55□□□□□ -2
UBFD1O14562 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.55□□□□□ -2
UBFD1O14562 RPS15AP40-201ENST00000419621 391 ntBASIC2.55□□□□□ -2
UBFD1O14562 HSPE1P1-201ENST00000421494 318 ntBASIC2.55□□□□□ -2
UBFD1O14562 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.55□□□□□ -2
UBFD1O14562 AL355994.1-201ENST00000424379 260 ntBASIC2.55□□□□□ -2
UBFD1O14562 AC073508.1-201ENST00000428866 656 ntBASIC2.55□□□□□ -2
UBFD1O14562 AC087499.2-201ENST00000432861 149 ntBASIC2.55□□□□□ -2
UBFD1O14562 PTP4A1P3-201ENST00000433661 420 ntBASIC2.55□□□□□ -2
UBFD1O14562 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.55□□□□□ -2
UBFD1O14562 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
UBFD1O14562 RPL32P28-201ENST00000443577 397 ntBASIC2.55□□□□□ -2
UBFD1O14562 RPL23AP20-201ENST00000447965 421 ntBASIC2.55□□□□□ -2
UBFD1O14562 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
UBFD1O14562 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.55□□□□□ -2
UBFD1O14562 AC008481.1-201ENST00000463278 396 ntBASIC2.55□□□□□ -2
UBFD1O14562 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.55□□□□□ -2
UBFD1O14562 RPL31P13-201ENST00000484151 370 ntBASIC2.55□□□□□ -2
UBFD1O14562 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
UBFD1O14562 RPS27P27-201ENST00000498779 255 ntBASIC2.55□□□□□ -2
UBFD1O14562 RN7SKP244-201ENST00000516513 307 ntBASIC2.55□□□□□ -2
UBFD1O14562 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
UBFD1O14562 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.55□□□□□ -2
UBFD1O14562 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.55□□□□□ -2
UBFD1O14562 ELOCP29-201ENST00000588193 334 ntBASIC2.55□□□□□ -2
UBFD1O14562 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.55□□□□□ -2
UBFD1O14562 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.55□□□□□ -2
UBFD1O14562 SUMO2P14-201ENST00000604488 293 ntBASIC2.55□□□□□ -2
UBFD1O14562 AC242628.1-201ENST00000606810 391 ntBASIC2.55□□□□□ -2
UBFD1O14562 AC110792.4-201ENST00000609843 298 ntBASIC2.55□□□□□ -2
UBFD1O14562 AC013412.1-201ENST00000610687 192 ntBASIC2.55□□□□□ -2
UBFD1O14562 MIR6864-201ENST00000617935 70 ntBASIC2.55□□□□□ -2
UBFD1O14562 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.55□□□□□ -2
UBFD1O14562 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
UBFD1O14562 AC007342.9-201ENST00000623877 1385 ntBASIC2.54□□□□□ -2
UBFD1O14562 OR5J1P-201ENST00000313544 939 ntBASIC2.54□□□□□ -2
UBFD1O14562 RNU6-600P-201ENST00000362524 99 ntBASIC2.54□□□□□ -2
UBFD1O14562 RNA5SP126-201ENST00000365092 109 ntBASIC2.54□□□□□ -2
UBFD1O14562 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
UBFD1O14562 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.54□□□□□ -2
UBFD1O14562 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
UBFD1O14562 RPL21P75-201ENST00000396599 483 ntBASIC2.54□□□□□ -2
UBFD1O14562 RPL21P28-201ENST00000401418 483 ntBASIC2.54□□□□□ -2
UBFD1O14562 DNAJC19P6-201ENST00000401853 280 ntBASIC2.54□□□□□ -2
UBFD1O14562 MTND4P13-201ENST00000402078 1023 ntBASIC2.54□□□□□ -2
UBFD1O14562 AL592114.1-201ENST00000403842 483 ntBASIC2.54□□□□□ -2
UBFD1O14562 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.54□□□□□ -2
UBFD1O14562 SSXP9-201ENST00000417503 292 ntBASIC2.54□□□□□ -2
UBFD1O14562 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.54□□□□□ -2
UBFD1O14562 FO393419.3-201ENST00000428741 282 ntBASIC2.54□□□□□ -2
UBFD1O14562 CKS1BP5-201ENST00000434172 273 ntBASIC2.54□□□□□ -2
UBFD1O14562 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC011816.1-201ENST00000441346 546 ntBASIC2.54□□□□□ -2
UBFD1O14562 snoU13.7-201ENST00000459220 104 ntBASIC2.54□□□□□ -2
UBFD1O14562 RPL21P39-201ENST00000463605 483 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC146507.1-201ENST00000468335 354 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC011979.1-201ENST00000472300 483 ntBASIC2.54□□□□□ -2
UBFD1O14562 RPL21P93-201ENST00000480465 489 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC233702.1-201ENST00000482905 502 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC087190.1-201ENST00000484462 480 ntBASIC2.54□□□□□ -2
UBFD1O14562 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.54□□□□□ -2
UBFD1O14562 AC093591.1-201ENST00000491435 481 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC090543.1-201ENST00000492168 485 ntBASIC2.54□□□□□ -2
UBFD1O14562 RPL21P16-201ENST00000495531 483 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.54□□□□□ -2
UBFD1O14562 AC026412.2-201ENST00000512270 1075 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC093755.1-201ENST00000512950 1023 ntBASIC2.54□□□□□ -2
UBFD1O14562 RNA5SP282-201ENST00000516355 108 ntBASIC2.54□□□□□ -2
UBFD1O14562 RNA5SP367-201ENST00000516557 118 ntBASIC2.54□□□□□ -2
UBFD1O14562 HMGB1P41-201ENST00000520234 440 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.54□□□□□ -2
UBFD1O14562 COX6CP8-201ENST00000522620 226 ntBASIC2.54□□□□□ -2
UBFD1O14562 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.54□□□□□ -2
UBFD1O14562 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.54□□□□□ -2
UBFD1O14562 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
UBFD1O14562 NOP56P3-201ENST00000549457 385 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC090751.1-201ENST00000566966 267 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
UBFD1O14562 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC103881.1-201ENST00000603476 538 ntBASIC2.54□□□□□ -2
UBFD1O14562 AP000787.2-201ENST00000604432 568 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC107294.1-201ENST00000609524 467 ntBASIC2.54□□□□□ -2
UBFD1O14562 AC004696.1-201ENST00000614345 607 ntBASIC2.54□□□□□ -2
UBFD1O14562 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
UBFD1O14562 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
UBFD1O14562 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.53□□□□□ -2
UBFD1O14562 AC004925.1-201ENST00000624256 2706 ntBASIC2.53□□□□□ -2
UBFD1O14562 MIR607-201ENST00000385241 96 ntBASIC2.53□□□□□ -2
UBFD1O14562 RNU1-101P-201ENST00000391171 127 ntBASIC2.53□□□□□ -2
UBFD1O14562 RPL19P1-201ENST00000411635 428 ntBASIC2.53□□□□□ -2
UBFD1O14562 USP9YP20-201ENST00000419224 558 ntBASIC2.53□□□□□ -2
UBFD1O14562 MTCO1P57-201ENST00000432182 261 ntBASIC2.53□□□□□ -2
UBFD1O14562 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.53□□□□□ -2
UBFD1O14562 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 274.3 ms