Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 VN1R85P-201ENST00000601587 426 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 BBIP1P1-201ENST00000602999 279 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AC008945.2-201ENST00000606056 604 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM38O00635 AC106028.5-201ENST00000610332 395 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AL596245.1-201ENST00000618994 362 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AL161637.1-201ENST00000622380 412 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM38O00635 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM38O00635 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM38O00635 AC027287.1-201ENST00000553115 1453 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 RPS4XP5-202ENST00000449995 1334 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM38O00635 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM38O00635 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM38O00635 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TRIM38O00635 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 MTND4P16-201ENST00000466108 1367 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM38O00635 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM38O00635 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM38O00635 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM38O00635 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM38O00635 AL672167.1-206ENST00000356293 943 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM38O00635 RNY4P24-201ENST00000362735 96 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 RNU6-989P-201ENST00000362756 107 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 RNU1-44P-201ENST00000384453 163 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 RPL23AP26-201ENST00000412728 464 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AIMP1P1-201ENST00000418670 937 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 UBTFL3-201ENST00000418934 1024 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM38O00635 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 AL512649.1-201ENST00000428997 581 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM38O00635 MED14P1-201ENST00000430517 648 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM38O00635 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM38O00635 SDCBPP1-201ENST00000440192 890 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM38O00635 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM38O00635 PHBP16-201ENST00000446318 950 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 ISCUP1-201ENST00000454451 448 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 BX322784.1-201ENST00000455793 1077 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM38O00635 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 RPL7P19-201ENST00000469948 618 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 HMGN1P10-201ENST00000474557 553 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 UBTFL6-201ENST00000477929 1024 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM38O00635 AC106872.3-201ENST00000495104 446 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 TXNP6-201ENST00000510190 310 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 OR5AP1P-201ENST00000529730 940 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC104383.1-201ENST00000530297 370 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM38O00635 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM38O00635 AC012414.6-201ENST00000568241 401 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC141257.3-201ENST00000572906 215 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC090616.5-202ENST00000582111 297 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.41□□□□□ -1.7
TRIM38O00635 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM38O00635 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM38O00635 AC112187.2-201ENST00000604345 283 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC128687.1-201ENST00000605304 619 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AL390208.1-201ENST00000605885 644 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AL391497.1-201ENST00000608671 547 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC020634.1-201ENST00000608701 549 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM38O00635 AL138721.1-201ENST00000616756 179 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC008443.7-201ENST00000622195 246 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 AC091905.2-201ENST00000623143 306 ntBASIC4.41□□□□□ -1.7
TRIM38O00635 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM38O00635 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM38O00635 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM38O00635 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM38O00635 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM38O00635 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM38O00635 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM38O00635 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
TRIM38O00635 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.4□□□□□ -1.7
TRIM38O00635 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TRIM38O00635 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM38O00635 AC092447.7-201ENST00000422212 1621 ntBASIC4.4□□□□□ -1.7
TRIM38O00635 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.4□□□□□ -1.7
TRIM38O00635 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM38O00635 RNU6-28P-201ENST00000362378 107 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 RNU4-21P-201ENST00000362802 126 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 RHOT1P2-201ENST00000366423 333 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM38O00635 MIR93-201ENST00000385024 80 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AC007899.1-201ENST00000412776 775 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 SNRPFP1-201ENST00000414761 252 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms