Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 AP006587.1-201ENST00000534129 1502 ntBASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 RAP2CP1-201ENST00000605103 478 ntBASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MRPS28Q9Y2Q9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
MRPS28Q9Y2Q9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRPS28Q9Y2Q9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRPS28Q9Y2Q9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.52■□□□□ 0.23
MRPS28Q9Y2Q9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.52■□□□□ 0.23
MRPS28Q9Y2Q9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRPS28Q9Y2Q9 KRT8P8-201ENST00000434750 1448 ntBASIC16.52■□□□□ 0.23
MRPS28Q9Y2Q9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MRPS28Q9Y2Q9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 MIR663A-201ENST00000385250 93 ntBASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 YBX1P10-201ENST00000444752 975 ntBASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 AC104581.1-202ENST00000635932 2618 ntBASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MRPS28Q9Y2Q9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 FP475955.4-201ENST00000623131 1990 ntBASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 DUSP5P2-201ENST00000426873 1033 ntBASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 AL121906.2-201ENST00000621597 723 ntBASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 AL031598.1-201ENST00000561511 1773 ntBASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.5■□□□□ 0.23
MRPS28Q9Y2Q9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 Z98044.1-201ENST00000632503 1764 ntBASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms