Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC24.69■■□□□ 1.54
ZNF428Q96B54 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
ZNF428Q96B54 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
ZNF428Q96B54 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
ZNF428Q96B54 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 TMPOP1-202ENST00000424642 1267 ntBASIC24.69■■□□□ 1.54
ZNF428Q96B54 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.69■■□□□ 1.54
ZNF428Q96B54 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZNF428Q96B54 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 LINC01568-207ENST00000641790 1380 ntBASIC24.68■■□□□ 1.54
ZNF428Q96B54 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZNF428Q96B54 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZNF428Q96B54 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZNF428Q96B54 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZNF428Q96B54 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZNF428Q96B54 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZNF428Q96B54 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZNF428Q96B54 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZNF428Q96B54 AC005521.1-201ENST00000393351 872 ntBASIC24.68■■□□□ 1.54
ZNF428Q96B54 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZNF428Q96B54 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.68■■□□□ 1.54
ZNF428Q96B54 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZNF428Q96B54 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZNF428Q96B54 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.67■■□□□ 1.54
ZNF428Q96B54 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ZNF428Q96B54 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZNF428Q96B54 RCC2P6-201ENST00000526625 1557 ntBASIC24.67■■□□□ 1.54
ZNF428Q96B54 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZNF428Q96B54 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZNF428Q96B54 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZNF428Q96B54 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.66■■□□□ 1.54
ZNF428Q96B54 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.66■■□□□ 1.54
ZNF428Q96B54 B3GAT3P1-201ENST00000471720 806 ntBASIC24.66■■□□□ 1.54
ZNF428Q96B54 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.66■■□□□ 1.54
ZNF428Q96B54 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.66■■□□□ 1.54
ZNF428Q96B54 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.66■■□□□ 1.54
ZNF428Q96B54 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZNF428Q96B54 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.66■■□□□ 1.54
ZNF428Q96B54 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZNF428Q96B54 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.66■■□□□ 1.54
ZNF428Q96B54 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZNF428Q96B54 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
ZNF428Q96B54 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZNF428Q96B54 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ZNF428Q96B54 AC004951.3-201ENST00000418645 1148 ntBASIC24.65■■□□□ 1.54
ZNF428Q96B54 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZNF428Q96B54 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZNF428Q96B54 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 FITM1-202ENST00000559294 800 ntBASIC24.65■■□□□ 1.54
ZNF428Q96B54 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZNF428Q96B54 AC130371.2-201ENST00000619443 611 ntBASIC24.65■■□□□ 1.54
ZNF428Q96B54 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZNF428Q96B54 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.65■■□□□ 1.54
ZNF428Q96B54 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZNF428Q96B54 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ZNF428Q96B54 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ZNF428Q96B54 FSCN1P1-201ENST00000568912 1481 ntBASIC24.64■■□□□ 1.54
ZNF428Q96B54 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ZNF428Q96B54 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZNF428Q96B54 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
ZNF428Q96B54 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.64■■□□□ 1.54
ZNF428Q96B54 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms