Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AC010542.4-201ENST00000563151 1910 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 GPR182-203ENST00000622922 591 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AC036111.1-201ENST00000533973 1582 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 RNA5SP421-201ENST00000516864 134 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 CR383656.12-201ENST00000549567 513 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 MIR6727-201ENST00000620702 65 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 IGHV3-47-201ENST00000425060 335 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AC015911.4-201ENST00000588022 1070 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 IGHV3-41-201ENST00000613121 348 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 AL162377.1-201ENST00000618844 1793 ntBASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 AC026471.6-201ENST00000622954 1905 ntBASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 TMEM261P1-201ENST00000604899 340 ntBASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 AC024243.1-201ENST00000609234 778 ntBASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 ANKRD20A8P-203ENST00000641373 517 ntBASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE2Q8WXH0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 U91328.1-201ENST00000437528 223 ntBASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 AC092910.1-201ENST00000482027 1129 ntBASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 TSEN15P1-201ENST00000423257 515 ntBASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 MIR4674-201ENST00000582457 87 ntBASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 AC025062.2-201ENST00000605477 670 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms