Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC079602.3-201ENST00000623931 403 ntBASIC23.38■■□□□ 1.33
SNED1Q8TER0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SNED1Q8TER0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SNED1Q8TER0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SNED1Q8TER0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
SNED1Q8TER0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SNED1Q8TER0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SNED1Q8TER0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SNED1Q8TER0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNED1Q8TER0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNED1Q8TER0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNED1Q8TER0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNED1Q8TER0 AC093525.10-201ENST00000625130 1569 ntBASIC23.37■■□□□ 1.33
SNED1Q8TER0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNED1Q8TER0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SNED1Q8TER0 IFNL4P1-201ENST00000607083 540 ntBASIC23.37■■□□□ 1.33
SNED1Q8TER0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNED1Q8TER0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SNED1Q8TER0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.37■■□□□ 1.33
SNED1Q8TER0 AL691432.2-201ENST00000607222 2038 ntBASIC23.37■■□□□ 1.33
SNED1Q8TER0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 AC004870.1-201ENST00000315132 882 ntBASIC23.36■■□□□ 1.33
SNED1Q8TER0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 AC104692.2-201ENST00000603054 253 ntBASIC23.36■■□□□ 1.33
SNED1Q8TER0 AL121672.3-201ENST00000608644 468 ntBASIC23.36■■□□□ 1.33
SNED1Q8TER0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SNED1Q8TER0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SNED1Q8TER0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SNED1Q8TER0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
SNED1Q8TER0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SNED1Q8TER0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNED1Q8TER0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 HLA-F-220ENST00000434407 884 ntBASIC23.35■■□□□ 1.33
SNED1Q8TER0 SEC1P-202ENST00000473944 940 ntBASIC23.35■■□□□ 1.33
SNED1Q8TER0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SNED1Q8TER0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNED1Q8TER0 AL512408.1-201ENST00000569378 2000 ntBASIC23.35■■□□□ 1.33
SNED1Q8TER0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNED1Q8TER0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 AC104417.2-201ENST00000562989 1793 ntBASIC23.35■■□□□ 1.33
SNED1Q8TER0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNED1Q8TER0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNED1Q8TER0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNED1Q8TER0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.35■■□□□ 1.33
SNED1Q8TER0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNED1Q8TER0 AC036111.1-201ENST00000533973 1582 ntBASIC23.34■■□□□ 1.33
SNED1Q8TER0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNED1Q8TER0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SNED1Q8TER0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNED1Q8TER0 AC009078.2-202ENST00000463353 338 ntBASIC23.34■■□□□ 1.33
SNED1Q8TER0 AC034232.1-201ENST00000506026 1064 ntBASIC23.34■■□□□ 1.33
SNED1Q8TER0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.34■■□□□ 1.33
SNED1Q8TER0 AP002414.4-201ENST00000589764 1148 ntBASIC23.34■■□□□ 1.33
SNED1Q8TER0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
SNED1Q8TER0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.34■■□□□ 1.33
SNED1Q8TER0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNED1Q8TER0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNED1Q8TER0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.34■■□□□ 1.33
SNED1Q8TER0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SNED1Q8TER0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SNED1Q8TER0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SNED1Q8TER0 AL162741.1-201ENST00000565563 1558 ntBASIC23.34■■□□□ 1.33
SNED1Q8TER0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SNED1Q8TER0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNED1Q8TER0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNED1Q8TER0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNED1Q8TER0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.33■■□□□ 1.33
SNED1Q8TER0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.33■■□□□ 1.33
SNED1Q8TER0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.33■■□□□ 1.33
SNED1Q8TER0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SNED1Q8TER0 AL031008.1-201ENST00000619963 541 ntBASIC23.33■■□□□ 1.33
SNED1Q8TER0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms