Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC124283.5-201ENST00000624661 1809 ntBASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 KRT18P16-201ENST00000510337 1294 ntBASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.79■□□□□ 0.28
RPS4Y2Q8TD47 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 ID1-201ENST00000376105 1233 ntBASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 CROCCP5-201ENST00000436658 830 ntBASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 RPS2P52-201ENST00000469610 820 ntBASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 AP006587.1-201ENST00000534129 1502 ntBASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4Y2Q8TD47 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms