Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC170Q8IYT3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 AL162430.1-201ENST00000480705 870 ntBASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 KRT18P16-201ENST00000510337 1294 ntBASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 AL050303.2-201ENST00000619798 666 ntBASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CCDC170Q8IYT3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 AL354751.1-201ENST00000412768 1863 ntBASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 RARRES2P6-201ENST00000567333 442 ntBASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 AC083906.6-201ENST00000641366 219 ntBASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC170Q8IYT3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC170Q8IYT3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC170Q8IYT3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CCDC170Q8IYT3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC170Q8IYT3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CCDC170Q8IYT3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC170Q8IYT3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CCDC170Q8IYT3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC170Q8IYT3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC170Q8IYT3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC170Q8IYT3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC170Q8IYT3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC170Q8IYT3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC170Q8IYT3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC170Q8IYT3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms