Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 STARP1-201ENST00000397973 869 ntBASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 NEK4P2-201ENST00000580004 1012 ntBASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEFF1Q8IYR6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEFF1Q8IYR6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 AL512408.1-201ENST00000569378 2000 ntBASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 AL691432.3-201ENST00000621860 400 ntBASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEFF1Q8IYR6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 SPDYE15P-201ENST00000424157 909 ntBASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEFF1Q8IYR6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms