Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 AC079834.2-201ENST00000609776 1949 ntBASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 AL022342.1-201ENST00000400363 863 ntBASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 ZNF444P1-201ENST00000559497 298 ntBASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 AL162377.1-201ENST00000618844 1793 ntBASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 AC092183.1-201ENST00000469884 875 ntBASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.85□□□□□ -0.51
VPS13BQ7Z7G8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 AC092720.2-201ENST00000602388 1665 ntBASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 CA15P1-201ENST00000481698 905 ntBASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 AL662844.1-201ENST00000546340 181 ntBASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 AC016734.2-201ENST00000624325 1377 ntBASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
VPS13BQ7Z7G8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
VPS13BQ7Z7G8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
VPS13BQ7Z7G8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC11.83□□□□□ -0.51
VPS13BQ7Z7G8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC11.83□□□□□ -0.51
VPS13BQ7Z7G8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
VPS13BQ7Z7G8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.83□□□□□ -0.51
VPS13BQ7Z7G8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC11.83□□□□□ -0.51
VPS13BQ7Z7G8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
VPS13BQ7Z7G8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms