Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.68□□□□□ -0.38
SCXQ7RTU7 REXO1L12P-201ENST00000622156 912 ntBASIC12.68□□□□□ -0.38
SCXQ7RTU7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.67□□□□□ -0.38
SCXQ7RTU7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCXQ7RTU7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 NBPF21P-201ENST00000425093 1451 ntBASIC12.66□□□□□ -0.38
SCXQ7RTU7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms