Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 MIR2861-201ENST00000636310 90 ntBASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 POM121L3P-201ENST00000419331 1163 ntBASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 AL359881.2-201ENST00000602973 570 ntBASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 AP001269.4-201ENST00000609611 512 ntBASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL13A1Q5TAT6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 AC093028.1-201ENST00000622998 982 ntBASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 AC124864.1-201ENST00000623408 392 ntBASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL13A1Q5TAT6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 GAPDHP21-201ENST00000450301 1010 ntBASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 FGFR3P6-201ENST00000457012 610 ntBASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 AL592071.1-201ENST00000611956 408 ntBASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL13A1Q5TAT6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 SIGLEC30P-201ENST00000455569 941 ntBASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 AC093512.1-201ENST00000617969 520 ntBASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL13A1Q5TAT6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms