Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.59■□□□□ 0.89
C9orf50Q5SZB4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.59■□□□□ 0.89
C9orf50Q5SZB4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf50Q5SZB4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
C9orf50Q5SZB4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
C9orf50Q5SZB4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf50Q5SZB4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf50Q5SZB4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.59■□□□□ 0.89
C9orf50Q5SZB4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 KRT18P58-201ENST00000527480 1120 ntBASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.58■□□□□ 0.89
C9orf50Q5SZB4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.58■□□□□ 0.88
C9orf50Q5SZB4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
C9orf50Q5SZB4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
C9orf50Q5SZB4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
C9orf50Q5SZB4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
C9orf50Q5SZB4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
C9orf50Q5SZB4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 AF106564.1-201ENST00000607058 2553 ntBASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 HMGN1P19-201ENST00000436976 333 ntBASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 AF238378.1-201ENST00000526806 358 ntBASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 AP001271.2-201ENST00000624018 1556 ntBASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
C9orf50Q5SZB4 Z83836.1-201ENST00000624605 1642 ntBASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
C9orf50Q5SZB4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 SAPCD2P3-201ENST00000455031 850 ntBASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 LINC02084-201ENST00000606069 1096 ntBASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 AC233702.3-201ENST00000578656 1387 ntBASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
C9orf50Q5SZB4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 REXO1L6P-202ENST00000619970 1078 ntBASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
C9orf50Q5SZB4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms