Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLRN1P58418 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLRN1P58418 AC124016.1-201ENST00000609552 612 ntBASIC17.15■□□□□ 0.34
CLRN1P58418 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLRN1P58418 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLRN1P58418 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.15■□□□□ 0.34
CLRN1P58418 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLRN1P58418 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.15■□□□□ 0.34
CLRN1P58418 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLRN1P58418 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLRN1P58418 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
CLRN1P58418 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLRN1P58418 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.15■□□□□ 0.34
CLRN1P58418 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
CLRN1P58418 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CLRN1P58418 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.15■□□□□ 0.34
CLRN1P58418 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLRN1P58418 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLRN1P58418 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLRN1P58418 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLRN1P58418 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLRN1P58418 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLRN1P58418 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 TEX21P-204ENST00000641479 1693 ntBASIC17.14■□□□□ 0.33
CLRN1P58418 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLRN1P58418 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.14■□□□□ 0.33
CLRN1P58418 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.14■□□□□ 0.33
CLRN1P58418 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.14■□□□□ 0.33
CLRN1P58418 KRT16P5-201ENST00000455284 522 ntBASIC17.14■□□□□ 0.33
CLRN1P58418 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.14■□□□□ 0.33
CLRN1P58418 C1QBPP2-201ENST00000528754 825 ntBASIC17.14■□□□□ 0.33
CLRN1P58418 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLRN1P58418 AC110285.5-201ENST00000611501 352 ntBASIC17.14■□□□□ 0.33
CLRN1P58418 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.14■□□□□ 0.33
CLRN1P58418 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.14■□□□□ 0.33
CLRN1P58418 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
CLRN1P58418 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLRN1P58418 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLRN1P58418 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.13■□□□□ 0.33
CLRN1P58418 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.13■□□□□ 0.33
CLRN1P58418 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.13■□□□□ 0.33
CLRN1P58418 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.13■□□□□ 0.33
CLRN1P58418 AC141586.3-201ENST00000562166 1838 ntBASIC17.13■□□□□ 0.33
CLRN1P58418 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.13■□□□□ 0.33
CLRN1P58418 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.13■□□□□ 0.33
CLRN1P58418 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.13■□□□□ 0.33
CLRN1P58418 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.13■□□□□ 0.33
CLRN1P58418 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CLRN1P58418 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.13■□□□□ 0.33
CLRN1P58418 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLRN1P58418 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 BX323043.1-201ENST00000641006 1765 ntBASIC17.12■□□□□ 0.33
CLRN1P58418 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.12■□□□□ 0.33
CLRN1P58418 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLRN1P58418 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CLRN1P58418 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 LINC01465-201ENST00000408887 1940 ntBASIC17.12■□□□□ 0.33
CLRN1P58418 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLRN1P58418 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLRN1P58418 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLRN1P58418 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.12■□□□□ 0.33
CLRN1P58418 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.12■□□□□ 0.33
CLRN1P58418 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLRN1P58418 AC133681.1-201ENST00000465482 601 ntBASIC17.12■□□□□ 0.33
CLRN1P58418 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.12■□□□□ 0.33
CLRN1P58418 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.12■□□□□ 0.33
CLRN1P58418 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.12■□□□□ 0.33
CLRN1P58418 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLRN1P58418 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.12■□□□□ 0.33
CLRN1P58418 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms