Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 AL671277.2-201ENST00000458060 996 ntBASIC17.23■□□□□ 0.35
CASP6P55212 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.23■□□□□ 0.35
CASP6P55212 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.23■□□□□ 0.35
CASP6P55212 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.23■□□□□ 0.35
CASP6P55212 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.23■□□□□ 0.35
CASP6P55212 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.23■□□□□ 0.35
CASP6P55212 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.23■□□□□ 0.35
CASP6P55212 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.23■□□□□ 0.35
CASP6P55212 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.23■□□□□ 0.35
CASP6P55212 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CASP6P55212 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASP6P55212 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASP6P55212 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.23■□□□□ 0.35
CASP6P55212 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CASP6P55212 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASP6P55212 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASP6P55212 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.23■□□□□ 0.35
CASP6P55212 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CASP6P55212 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CASP6P55212 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.22■□□□□ 0.35
CASP6P55212 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.22■□□□□ 0.35
CASP6P55212 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.22■□□□□ 0.35
CASP6P55212 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 AL359075.1-203ENST00000462729 1002 ntBASIC17.22■□□□□ 0.35
CASP6P55212 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.22■□□□□ 0.35
CASP6P55212 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.22■□□□□ 0.35
CASP6P55212 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CASP6P55212 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASP6P55212 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.22■□□□□ 0.35
CASP6P55212 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CASP6P55212 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CASP6P55212 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CASP6P55212 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.21■□□□□ 0.35
CASP6P55212 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.21■□□□□ 0.35
CASP6P55212 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.21■□□□□ 0.35
CASP6P55212 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 BX119927.1-201ENST00000636596 1552 ntBASIC17.21■□□□□ 0.35
CASP6P55212 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CASP6P55212 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CASP6P55212 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CASP6P55212 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.21■□□□□ 0.35
CASP6P55212 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.21■□□□□ 0.35
CASP6P55212 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.21■□□□□ 0.35
CASP6P55212 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.21■□□□□ 0.35
CASP6P55212 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.21■□□□□ 0.35
CASP6P55212 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.21■□□□□ 0.35
CASP6P55212 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.21■□□□□ 0.35
CASP6P55212 CKBP1-201ENST00000565489 1086 ntBASIC17.21■□□□□ 0.35
CASP6P55212 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.21■□□□□ 0.35
CASP6P55212 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.21■□□□□ 0.35
CASP6P55212 AC093458.2-201ENST00000623150 629 ntBASIC17.21■□□□□ 0.35
CASP6P55212 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
CASP6P55212 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.21■□□□□ 0.35
CASP6P55212 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASP6P55212 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.21■□□□□ 0.34
CASP6P55212 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CASP6P55212 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CASP6P55212 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.2■□□□□ 0.34
CASP6P55212 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASP6P55212 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASP6P55212 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CASP6P55212 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASP6P55212 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.2■□□□□ 0.34
CASP6P55212 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASP6P55212 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASP6P55212 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASP6P55212 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASP6P55212 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CASP6P55212 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms