Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK1P53667 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LIMK1P53667 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.98■□□□□ 0.63
LIMK1P53667 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.98■□□□□ 0.63
LIMK1P53667 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK1P53667 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK1P53667 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.98■□□□□ 0.63
LIMK1P53667 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK1P53667 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK1P53667 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK1P53667 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.97■□□□□ 0.63
LIMK1P53667 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.97■□□□□ 0.63
LIMK1P53667 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK1P53667 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LIMK1P53667 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.97■□□□□ 0.63
LIMK1P53667 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LIMK1P53667 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.97■□□□□ 0.63
LIMK1P53667 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK1P53667 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK1P53667 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK1P53667 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.97■□□□□ 0.63
LIMK1P53667 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
LIMK1P53667 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LIMK1P53667 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
LIMK1P53667 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK1P53667 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK1P53667 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LIMK1P53667 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.96■□□□□ 0.63
LIMK1P53667 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.96■□□□□ 0.63
LIMK1P53667 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.96■□□□□ 0.63
LIMK1P53667 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
LIMK1P53667 AC073314.1-201ENST00000568729 2216 ntBASIC18.96■□□□□ 0.63
LIMK1P53667 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 AP003041.3-201ENST00000527151 707 ntBASIC18.96■□□□□ 0.63
LIMK1P53667 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.96■□□□□ 0.63
LIMK1P53667 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.96■□□□□ 0.63
LIMK1P53667 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.96■□□□□ 0.63
LIMK1P53667 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LIMK1P53667 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LIMK1P53667 AFG3L1P-217ENST00000557444 2447 ntBASIC18.96■□□□□ 0.63
LIMK1P53667 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.96■□□□□ 0.63
LIMK1P53667 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
LIMK1P53667 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LIMK1P53667 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK1P53667 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.96■□□□□ 0.63
LIMK1P53667 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.96■□□□□ 0.63
LIMK1P53667 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
LIMK1P53667 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.95■□□□□ 0.62
LIMK1P53667 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK1P53667 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.95■□□□□ 0.62
LIMK1P53667 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.95■□□□□ 0.62
LIMK1P53667 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
LIMK1P53667 AC018553.1-201ENST00000616682 1458 ntBASIC18.95■□□□□ 0.62
LIMK1P53667 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK1P53667 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK1P53667 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK1P53667 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LIMK1P53667 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.94■□□□□ 0.62
LIMK1P53667 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
LIMK1P53667 AL022342.1-201ENST00000400363 863 ntBASIC18.94■□□□□ 0.62
LIMK1P53667 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.94■□□□□ 0.62
LIMK1P53667 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.94■□□□□ 0.62
LIMK1P53667 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.94■□□□□ 0.62
LIMK1P53667 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.94■□□□□ 0.62
LIMK1P53667 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.94■□□□□ 0.62
LIMK1P53667 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.94■□□□□ 0.62
LIMK1P53667 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK1P53667 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.94■□□□□ 0.62
LIMK1P53667 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.93■□□□□ 0.62
LIMK1P53667 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.93■□□□□ 0.62
LIMK1P53667 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms