Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.2■□□□□ 0.98
GPC3P51654 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.2■□□□□ 0.98
GPC3P51654 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.2■□□□□ 0.98
GPC3P51654 SLC25A1P2-201ENST00000430693 912 ntBASIC21.2■□□□□ 0.98
GPC3P51654 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.2■□□□□ 0.98
GPC3P51654 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.2■□□□□ 0.98
GPC3P51654 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.2■□□□□ 0.98
GPC3P51654 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.2■□□□□ 0.98
GPC3P51654 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
GPC3P51654 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.2■□□□□ 0.98
GPC3P51654 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.19■□□□□ 0.98
GPC3P51654 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GPC3P51654 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GPC3P51654 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.19■□□□□ 0.98
GPC3P51654 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.19■□□□□ 0.98
GPC3P51654 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.19■□□□□ 0.98
GPC3P51654 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 CKBP1-201ENST00000565489 1086 ntBASIC21.19■□□□□ 0.98
GPC3P51654 AC116562.4-202ENST00000641738 218 ntBASIC21.19■□□□□ 0.98
GPC3P51654 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.19■□□□□ 0.98
GPC3P51654 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.19■□□□□ 0.98
GPC3P51654 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GPC3P51654 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC3P51654 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC3P51654 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.18■□□□□ 0.98
GPC3P51654 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC3P51654 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC3P51654 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.18■□□□□ 0.98
GPC3P51654 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC3P51654 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GPC3P51654 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
GPC3P51654 CCR12P-201ENST00000446203 998 ntBASIC21.18■□□□□ 0.98
GPC3P51654 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.18■□□□□ 0.98
GPC3P51654 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GPC3P51654 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.18■□□□□ 0.98
GPC3P51654 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC3P51654 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.18■□□□□ 0.98
GPC3P51654 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
GPC3P51654 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC3P51654 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.18■□□□□ 0.98
GPC3P51654 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC3P51654 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.18■□□□□ 0.98
GPC3P51654 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
GPC3P51654 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.17■□□□□ 0.98
GPC3P51654 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC3P51654 LIN28AP1-201ENST00000429574 405 ntBASIC21.17■□□□□ 0.98
GPC3P51654 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC3P51654 AC007663.1-201ENST00000438948 1240 ntBASIC21.17■□□□□ 0.98
GPC3P51654 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.17■□□□□ 0.98
GPC3P51654 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
GPC3P51654 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.17■□□□□ 0.98
GPC3P51654 AL049597.2-201ENST00000565575 961 ntBASIC21.17■□□□□ 0.98
GPC3P51654 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
GPC3P51654 AL023803.3-201ENST00000615559 522 ntBASIC21.17■□□□□ 0.98
GPC3P51654 AC092338.2-201ENST00000568827 1415 ntBASIC21.17■□□□□ 0.98
GPC3P51654 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.17■□□□□ 0.98
GPC3P51654 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.17■□□□□ 0.98
GPC3P51654 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC3P51654 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GPC3P51654 AC104417.2-201ENST00000562989 1793 ntBASIC21.17■□□□□ 0.98
GPC3P51654 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC3P51654 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
GPC3P51654 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC3P51654 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC3P51654 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GPC3P51654 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.16■□□□□ 0.98
GPC3P51654 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
GPC3P51654 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
GPC3P51654 HMGA1P5-201ENST00000412453 271 ntBASIC21.16■□□□□ 0.98
GPC3P51654 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.16■□□□□ 0.98
GPC3P51654 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
GPC3P51654 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GPC3P51654 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.16■□□□□ 0.98
GPC3P51654 AL445228.2-201ENST00000605589 952 ntBASIC21.16■□□□□ 0.98
GPC3P51654 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GPC3P51654 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC3P51654 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC3P51654 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC3P51654 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GPC3P51654 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.15■□□□□ 0.98
GPC3P51654 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms