Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
APCP25054 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APCP25054 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.18■□□□□ 0.18
APCP25054 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APCP25054 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
APCP25054 GPAT2P1-201ENST00000444924 1672 ntBASIC16.18■□□□□ 0.18
APCP25054 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APCP25054 Z83836.1-201ENST00000624605 1642 ntBASIC16.18■□□□□ 0.18
APCP25054 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APCP25054 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
APCP25054 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.18■□□□□ 0.18
APCP25054 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.18■□□□□ 0.18
APCP25054 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.18■□□□□ 0.18
APCP25054 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.18■□□□□ 0.18
APCP25054 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APCP25054 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.17■□□□□ 0.18
APCP25054 AL391807.1-203ENST00000604392 2365 ntBASIC16.17■□□□□ 0.18
APCP25054 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
APCP25054 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.17■□□□□ 0.18
APCP25054 AC148477.8-201ENST00000624298 468 ntBASIC16.17■□□□□ 0.18
APCP25054 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.17■□□□□ 0.18
APCP25054 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.17■□□□□ 0.18
APCP25054 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.17■□□□□ 0.18
APCP25054 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.17■□□□□ 0.18
APCP25054 RPL13AP23-201ENST00000480739 586 ntBASIC16.17■□□□□ 0.18
APCP25054 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APCP25054 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.16■□□□□ 0.18
APCP25054 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APCP25054 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
APCP25054 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APCP25054 AC009065.1-201ENST00000564055 1225 ntBASIC16.16■□□□□ 0.18
APCP25054 AC244015.2-201ENST00000616358 1861 ntBASIC16.16■□□□□ 0.18
APCP25054 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APCP25054 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APCP25054 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.16■□□□□ 0.18
APCP25054 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APCP25054 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APCP25054 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.16■□□□□ 0.18
APCP25054 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APCP25054 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APCP25054 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.16■□□□□ 0.18
APCP25054 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.16■□□□□ 0.18
APCP25054 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
APCP25054 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APCP25054 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APCP25054 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
APCP25054 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APCP25054 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.15■□□□□ 0.18
APCP25054 AC098831.1-202ENST00000438821 336 ntBASIC16.15■□□□□ 0.18
APCP25054 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.15■□□□□ 0.18
APCP25054 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
APCP25054 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.15■□□□□ 0.18
APCP25054 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.15■□□□□ 0.18
APCP25054 AC106730.1-201ENST00000566722 1090 ntBASIC16.15■□□□□ 0.18
APCP25054 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
APCP25054 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.15■□□□□ 0.18
APCP25054 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
APCP25054 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.15■□□□□ 0.18
APCP25054 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.15■□□□□ 0.18
APCP25054 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
APCP25054 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.15■□□□□ 0.18
APCP25054 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.15■□□□□ 0.18
APCP25054 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.15■□□□□ 0.18
APCP25054 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.15■□□□□ 0.18
APCP25054 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APCP25054 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.14■□□□□ 0.18
APCP25054 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
APCP25054 IGHV3-47-201ENST00000425060 335 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms