Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
TOP2AP11388 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC33.66■■■□□ 2.98
TOP2AP11388 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
TOP2AP11388 PVRIG2P-201ENST00000435460 978 ntBASIC33.66■■■□□ 2.98
TOP2AP11388 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC33.66■■■□□ 2.98
TOP2AP11388 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC33.66■■■□□ 2.98
TOP2AP11388 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC33.66■■■□□ 2.98
TOP2AP11388 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC33.66■■■□□ 2.98
TOP2AP11388 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
TOP2AP11388 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC33.65■■■□□ 2.98
TOP2AP11388 PPIH-202ENST00000372549 327 ntTSL 3 BASIC33.65■■■□□ 2.98
TOP2AP11388 FDX1P1-201ENST00000449115 551 ntBASIC33.65■■■□□ 2.98
TOP2AP11388 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC33.65■■■□□ 2.98
TOP2AP11388 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC33.65■■■□□ 2.98
TOP2AP11388 MIR3652-201ENST00000579335 131 ntBASIC33.65■■■□□ 2.98
TOP2AP11388 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
TOP2AP11388 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
TOP2AP11388 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC33.65■■■□□ 2.98
TOP2AP11388 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC33.64■■■□□ 2.98
TOP2AP11388 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
TOP2AP11388 AL121672.3-201ENST00000608644 468 ntBASIC33.64■■■□□ 2.98
TOP2AP11388 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
TOP2AP11388 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC33.64■■■□□ 2.98
TOP2AP11388 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC33.64■■■□□ 2.98
TOP2AP11388 PALM-208ENST00000592155 2272 ntTSL 4 BASIC33.64■■■□□ 2.98
TOP2AP11388 TCF3P1-201ENST00000423021 1937 ntBASIC33.64■■■□□ 2.98
TOP2AP11388 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC33.64■■■□□ 2.98
TOP2AP11388 AL162741.1-201ENST00000565563 1558 ntBASIC33.64■■■□□ 2.98
TOP2AP11388 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
TOP2AP11388 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
TOP2AP11388 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC33.64■■■□□ 2.98
TOP2AP11388 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC33.63■■■□□ 2.97
TOP2AP11388 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC33.63■■■□□ 2.97
TOP2AP11388 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC33.63■■■□□ 2.97
TOP2AP11388 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC33.63■■■□□ 2.97
TOP2AP11388 IFNL4P1-201ENST00000607083 540 ntBASIC33.63■■■□□ 2.97
TOP2AP11388 AC024243.1-201ENST00000609234 778 ntBASIC33.63■■■□□ 2.97
TOP2AP11388 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
TOP2AP11388 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
TOP2AP11388 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
TOP2AP11388 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
TOP2AP11388 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
TOP2AP11388 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC33.63■■■□□ 2.97
TOP2AP11388 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC33.63■■■□□ 2.97
TOP2AP11388 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC33.63■■■□□ 2.97
TOP2AP11388 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC33.63■■■□□ 2.97
TOP2AP11388 AC099778.1-201ENST00000568593 1911 ntBASIC33.62■■■□□ 2.97
TOP2AP11388 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC33.62■■■□□ 2.97
TOP2AP11388 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC33.62■■■□□ 2.97
TOP2AP11388 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC33.62■■■□□ 2.97
TOP2AP11388 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
TOP2AP11388 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC33.62■■■□□ 2.97
TOP2AP11388 AL157888.1-201ENST00000631930 593 ntBASIC33.62■■■□□ 2.97
TOP2AP11388 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
TOP2AP11388 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC33.62■■■□□ 2.97
TOP2AP11388 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC33.61■■■□□ 2.97
TOP2AP11388 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC33.61■■■□□ 2.97
TOP2AP11388 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC33.61■■■□□ 2.97
TOP2AP11388 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC33.61■■■□□ 2.97
TOP2AP11388 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC33.61■■■□□ 2.97
TOP2AP11388 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
TOP2AP11388 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC33.61■■■□□ 2.97
TOP2AP11388 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC33.61■■■□□ 2.97
TOP2AP11388 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC33.61■■■□□ 2.97
TOP2AP11388 TPSP2-201ENST00000561760 610 ntBASIC33.61■■■□□ 2.97
TOP2AP11388 AC092329.2-201ENST00000598402 547 ntBASIC33.61■■■□□ 2.97
TOP2AP11388 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC33.61■■■□□ 2.97
TOP2AP11388 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
TOP2AP11388 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC33.61■■■□□ 2.97
TOP2AP11388 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC33.61■■■□□ 2.97
TOP2AP11388 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC33.6■■■□□ 2.97
TOP2AP11388 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC33.6■■■□□ 2.97
TOP2AP11388 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
TOP2AP11388 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC33.6■■■□□ 2.97
TOP2AP11388 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
TOP2AP11388 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
TOP2AP11388 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC33.6■■■□□ 2.97
TOP2AP11388 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC33.6■■■□□ 2.97
TOP2AP11388 AC011498.5-201ENST00000592027 486 ntBASIC33.6■■■□□ 2.97
TOP2AP11388 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
TOP2AP11388 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
TOP2AP11388 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC33.6■■■□□ 2.97
TOP2AP11388 CHCHD2P8-201ENST00000429873 447 ntBASIC33.59■■■□□ 2.97
TOP2AP11388 MCCD1P1-208ENST00000445732 328 ntBASIC33.59■■■□□ 2.97
TOP2AP11388 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC33.59■■■□□ 2.97
TOP2AP11388 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC33.59■■■□□ 2.97
TOP2AP11388 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC33.59■■■□□ 2.97
TOP2AP11388 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC33.59■■■□□ 2.97
TOP2AP11388 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC33.59■■■□□ 2.97
TOP2AP11388 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
TOP2AP11388 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
TOP2AP11388 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
TOP2AP11388 KRT17P6-201ENST00000453795 1220 ntBASIC33.58■■■□□ 2.97
TOP2AP11388 BX276092.5-203ENST00000456199 560 ntBASIC33.58■■■□□ 2.97
TOP2AP11388 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC33.58■■■□□ 2.97
TOP2AP11388 AP002414.4-201ENST00000589764 1148 ntBASIC33.58■■■□□ 2.97
TOP2AP11388 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC33.58■■■□□ 2.97
TOP2AP11388 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC33.58■■■□□ 2.97
TOP2AP11388 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
TOP2AP11388 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC33.58■■■□□ 2.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms