Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DRAP01903 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DRAP01903 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.66■□□□□ 0.9
HLA-DRAP01903 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DRAP01903 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.66■□□□□ 0.9
HLA-DRAP01903 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.66■□□□□ 0.9
HLA-DRAP01903 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DRAP01903 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DRAP01903 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.66■□□□□ 0.9
HLA-DRAP01903 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DRAP01903 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DRAP01903 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DRAP01903 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HLA-DRAP01903 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HLA-DRAP01903 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DRAP01903 TSPY7P-201ENST00000431358 1114 ntBASIC20.65■□□□□ 0.9
HLA-DRAP01903 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.65■□□□□ 0.9
HLA-DRAP01903 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 B3GAT3P1-201ENST00000471720 806 ntBASIC20.65■□□□□ 0.9
HLA-DRAP01903 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.65■□□□□ 0.9
HLA-DRAP01903 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HLA-DRAP01903 AC011298.2-201ENST00000617989 482 ntBASIC20.65■□□□□ 0.9
HLA-DRAP01903 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HLA-DRAP01903 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DRAP01903 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DRAP01903 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.64■□□□□ 0.9
HLA-DRAP01903 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DRAP01903 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
HLA-DRAP01903 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.64■□□□□ 0.9
HLA-DRAP01903 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.64■□□□□ 0.9
HLA-DRAP01903 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.64■□□□□ 0.9
HLA-DRAP01903 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DRAP01903 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DRAP01903 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DRAP01903 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DRAP01903 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 TSPY21P-201ENST00000433481 731 ntBASIC20.64■□□□□ 0.89
HLA-DRAP01903 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DRAP01903 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DRAP01903 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HLA-DRAP01903 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DRAP01903 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DRAP01903 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DRAP01903 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DRAP01903 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DRAP01903 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 SNORA78-201ENST00000459373 127 ntBASIC20.63■□□□□ 0.89
HLA-DRAP01903 AC116562.2-201ENST00000507042 360 ntBASIC20.63■□□□□ 0.89
HLA-DRAP01903 AC093827.2-201ENST00000512654 315 ntBASIC20.63■□□□□ 0.89
HLA-DRAP01903 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DRAP01903 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 AC026471.5-201ENST00000615068 467 ntBASIC20.63■□□□□ 0.89
HLA-DRAP01903 AC130371.2-201ENST00000619443 611 ntBASIC20.63■□□□□ 0.89
HLA-DRAP01903 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DRAP01903 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DRAP01903 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DRAP01903 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DRAP01903 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
HLA-DRAP01903 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HLA-DRAP01903 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DRAP01903 AL355355.2-201ENST00000442321 338 ntBASIC20.62■□□□□ 0.89
HLA-DRAP01903 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DRAP01903 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms