Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AC104417.2-201ENST00000562989 1793 ntBASIC19.18■□□□□ 0.66
PCDH8O95206 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH8O95206 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH8O95206 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PCDH8O95206 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PCDH8O95206 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH8O95206 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH8O95206 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH8O95206 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH8O95206 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH8O95206 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH8O95206 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH8O95206 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH8O95206 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH8O95206 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH8O95206 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
PCDH8O95206 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH8O95206 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDH8O95206 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDH8O95206 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDH8O95206 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
PCDH8O95206 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 AC007663.1-201ENST00000438948 1240 ntBASIC19.17■□□□□ 0.66
PCDH8O95206 TSPY17P-201ENST00000450329 467 ntBASIC19.17■□□□□ 0.66
PCDH8O95206 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
PCDH8O95206 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH8O95206 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDH8O95206 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH8O95206 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDH8O95206 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH8O95206 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
PCDH8O95206 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDH8O95206 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
PCDH8O95206 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
PCDH8O95206 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH8O95206 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH8O95206 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH8O95206 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDH8O95206 AL590326.2-201ENST00000625139 305 ntBASIC19.16■□□□□ 0.66
PCDH8O95206 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH8O95206 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDH8O95206 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH8O95206 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 KRT8P11-201ENST00000409686 1436 ntBASIC19.16■□□□□ 0.66
PCDH8O95206 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.16■□□□□ 0.66
PCDH8O95206 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH8O95206 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH8O95206 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 PRSS44-201ENST00000515154 1146 ntBASIC19.15■□□□□ 0.66
PCDH8O95206 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
PCDH8O95206 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PCDH8O95206 AL445228.2-201ENST00000605589 952 ntBASIC19.15■□□□□ 0.66
PCDH8O95206 AC010653.2-201ENST00000623505 997 ntBASIC19.15■□□□□ 0.66
PCDH8O95206 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH8O95206 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDH8O95206 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDH8O95206 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH8O95206 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDH8O95206 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH8O95206 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH8O95206 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH8O95206 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH8O95206 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PCDH8O95206 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDH8O95206 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDH8O95206 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms