Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.45■□□□□ 0.86
SOX1O00570 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.45■□□□□ 0.86
SOX1O00570 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.45■□□□□ 0.86
SOX1O00570 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SOX1O00570 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SOX1O00570 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOX1O00570 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.44■□□□□ 0.86
SOX1O00570 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SOX1O00570 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOX1O00570 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.44■□□□□ 0.86
SOX1O00570 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOX1O00570 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOX1O00570 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SOX1O00570 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.44■□□□□ 0.86
SOX1O00570 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.44■□□□□ 0.86
SOX1O00570 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.44■□□□□ 0.86
SOX1O00570 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
SOX1O00570 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.44■□□□□ 0.86
SOX1O00570 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.44■□□□□ 0.86
SOX1O00570 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SOX1O00570 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOX1O00570 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
SOX1O00570 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SOX1O00570 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SOX1O00570 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.43■□□□□ 0.86
SOX1O00570 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.43■□□□□ 0.86
SOX1O00570 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.43■□□□□ 0.86
SOX1O00570 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SOX1O00570 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 YBX2P1-201ENST00000394192 760 ntBASIC20.43■□□□□ 0.86
SOX1O00570 FAM8A3P-201ENST00000427218 844 ntBASIC20.43■□□□□ 0.86
SOX1O00570 CYMP-203ENST00000474680 1263 ntBASIC20.43■□□□□ 0.86
SOX1O00570 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.43■□□□□ 0.86
SOX1O00570 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.43■□□□□ 0.86
SOX1O00570 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOX1O00570 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.43■□□□□ 0.86
SOX1O00570 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.42■□□□□ 0.86
SOX1O00570 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.42■□□□□ 0.86
SOX1O00570 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.42■□□□□ 0.86
SOX1O00570 AC005229.4-201ENST00000610085 2198 ntBASIC20.42■□□□□ 0.86
SOX1O00570 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOX1O00570 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOX1O00570 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SOX1O00570 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SOX1O00570 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOX1O00570 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SOX1O00570 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.42■□□□□ 0.86
SOX1O00570 SEC1P-202ENST00000473944 940 ntBASIC20.42■□□□□ 0.86
SOX1O00570 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.42■□□□□ 0.86
SOX1O00570 AC092364.2-202ENST00000597012 1073 ntBASIC20.42■□□□□ 0.86
SOX1O00570 AC116407.3-201ENST00000623905 1129 ntBASIC20.42■□□□□ 0.86
SOX1O00570 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOX1O00570 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SOX1O00570 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOX1O00570 NSUN5P1-202ENST00000421140 1535 ntBASIC20.42■□□□□ 0.86
SOX1O00570 NSUN5P2-203ENST00000457352 1529 ntBASIC20.42■□□□□ 0.86
SOX1O00570 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOX1O00570 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOX1O00570 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.42■□□□□ 0.86
SOX1O00570 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.42■□□□□ 0.86
SOX1O00570 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.41■□□□□ 0.86
SOX1O00570 C1orf229-201ENST00000623686 2258 ntBASIC20.41■□□□□ 0.86
SOX1O00570 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.41■□□□□ 0.86
SOX1O00570 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 DNAJB3-202ENST00000449667 1266 ntBASIC20.41■□□□□ 0.86
SOX1O00570 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.41■□□□□ 0.86
SOX1O00570 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.41■□□□□ 0.86
SOX1O00570 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.41■□□□□ 0.86
SOX1O00570 AC027601.4-201ENST00000611259 610 ntBASIC20.41■□□□□ 0.86
SOX1O00570 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.41■□□□□ 0.86
SOX1O00570 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.41■□□□□ 0.86
SOX1O00570 FAM215A-202ENST00000632077 792 ntBASIC20.41■□□□□ 0.86
SOX1O00570 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SOX1O00570 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SOX1O00570 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SOX1O00570 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX1O00570 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
SOX1O00570 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms