Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1AO00555 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
CACNA1AO00555 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1AO00555 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CACNA1AO00555 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1AO00555 AC063926.2-201ENST00000623766 1308 ntBASIC18.12■□□□□ 0.49
CACNA1AO00555 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CACNA1AO00555 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1AO00555 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1AO00555 BCRP1-201ENST00000444246 691 ntBASIC18.12■□□□□ 0.49
CACNA1AO00555 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1AO00555 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CACNA1AO00555 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CACNA1AO00555 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1AO00555 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1AO00555 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1AO00555 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CACNA1AO00555 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1AO00555 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1AO00555 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1AO00555 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CACNA1AO00555 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CACNA1AO00555 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1AO00555 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1AO00555 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1AO00555 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1AO00555 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1AO00555 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1AO00555 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CACNA1AO00555 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CACNA1AO00555 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CACNA1AO00555 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.11■□□□□ 0.49
CACNA1AO00555 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.11■□□□□ 0.49
CACNA1AO00555 SLC25A6P5-201ENST00000435663 894 ntBASIC18.11■□□□□ 0.49
CACNA1AO00555 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.11■□□□□ 0.49
CACNA1AO00555 AC106028.4-201ENST00000614509 607 ntBASIC18.11■□□□□ 0.49
CACNA1AO00555 AF228730.6-201ENST00000641497 218 ntBASIC18.11■□□□□ 0.49
CACNA1AO00555 AC084121.3-201ENST00000641716 218 ntBASIC18.11■□□□□ 0.49
CACNA1AO00555 AC105233.6-201ENST00000642093 218 ntBASIC18.11■□□□□ 0.49
CACNA1AO00555 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.11■□□□□ 0.49
CACNA1AO00555 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CACNA1AO00555 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.11■□□□□ 0.49
CACNA1AO00555 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.11■□□□□ 0.49
CACNA1AO00555 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.11■□□□□ 0.49
CACNA1AO00555 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.11■□□□□ 0.49
CACNA1AO00555 AL355877.3-201ENST00000622820 899 ntBASIC18.11■□□□□ 0.49
CACNA1AO00555 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
CACNA1AO00555 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1AO00555 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.1■□□□□ 0.49
CACNA1AO00555 KRT8P11-201ENST00000409686 1436 ntBASIC18.1■□□□□ 0.49
CACNA1AO00555 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1AO00555 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1AO00555 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1AO00555 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1AO00555 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.1■□□□□ 0.49
CACNA1AO00555 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CACNA1AO00555 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1AO00555 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.1■□□□□ 0.49
CACNA1AO00555 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1AO00555 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.1■□□□□ 0.49
CACNA1AO00555 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CACNA1AO00555 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1AO00555 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.1■□□□□ 0.49
CACNA1AO00555 CNN2P11-201ENST00000429351 262 ntBASIC18.1■□□□□ 0.49
CACNA1AO00555 RPS2P1-201ENST00000434010 821 ntBASIC18.1■□□□□ 0.49
CACNA1AO00555 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.1■□□□□ 0.49
CACNA1AO00555 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.1■□□□□ 0.49
CACNA1AO00555 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1AO00555 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1AO00555 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.1■□□□□ 0.49
CACNA1AO00555 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1AO00555 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1AO00555 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.09■□□□□ 0.49
CACNA1AO00555 AC091607.1-201ENST00000490318 1060 ntBASIC18.09■□□□□ 0.49
CACNA1AO00555 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.09■□□□□ 0.49
CACNA1AO00555 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.09■□□□□ 0.49
CACNA1AO00555 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1AO00555 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1AO00555 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1AO00555 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.09■□□□□ 0.49
CACNA1AO00555 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms