Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU1-44P-201ENST00000384453 163 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 HDGFP1-201ENST00000405943 252 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC007899.1-201ENST00000412776 775 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 DUTP6-201ENST00000425573 462 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 MTCO3P5-201ENST00000433620 714 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC091390.1-201ENST00000433904 331 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 CBX1P1-201ENST00000440184 427 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 RPL5P32-201ENST00000454085 879 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC007967.1-201ENST00000455422 1159 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 RPS27AP17-201ENST00000463344 455 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 ACTR3P3-201ENST00000480448 893 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC110792.1-201ENST00000491826 472 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 RN7SL810P-201ENST00000493031 276 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU2-58P-201ENST00000516403 183 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC105233.3-201ENST00000531125 744 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 RFPL1S-203ENST00000539579 330 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 RPL21P5-201ENST00000554662 472 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 FAM60BP-201ENST00000578364 658 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC040904.1-201ENST00000590850 223 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC090970.3-201ENST00000612566 866 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AP001506.1-201ENST00000615444 211 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 MLECP1-201ENST00000615893 709 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AL713922.2-201ENST00000619384 716 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC112204.3-201ENST00000623822 332 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 TAB3P1-202ENST00000452645 1634 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU6-600P-201ENST00000362524 99 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 RNA5SP307-201ENST00000362863 116 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 Y_RNA.194-201ENST00000363985 102 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 MRPL42P2-201ENST00000403169 426 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU4-65P-201ENST00000410473 140 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 SNRPFP1-201ENST00000414761 252 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 SPA17P1-201ENST00000416656 452 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 SSXP9-201ENST00000417503 292 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 RPS29P17-201ENST00000430795 166 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 TPT1P14-201ENST00000448018 505 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC108059.3-201ENST00000456388 214 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 RN7SL98P-201ENST00000462271 300 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 RPL7P24-201ENST00000493052 752 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 VN1R104P-201ENST00000505115 1009 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC022447.1-201ENST00000515358 464 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 OR5M7P-201ENST00000526140 972 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 BNIP3P5-201ENST00000562290 498 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AL157394.1-201ENST00000562983 1224 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC009977.1-201ENST00000586015 570 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC007038.2-201ENST00000608095 740 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC006023.2-201ENST00000609916 167 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 MIR6891-201ENST00000618788 93 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC012150.2-201ENST00000621300 544 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC067931.1-201ENST00000624190 671 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AC011944.2-201ENST00000624440 683 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 AL159972.1-201ENST00000625150 448 ntBASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL4A3BPQ9Y5P4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms