Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AP006245.1-201ENST00000522549 120 ntBASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 PDCL2P2-201ENST00000533651 189 ntBASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AC053481.3-201ENST00000577881 843 ntBASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AC010591.1-201ENST00000603941 649 ntBASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AC073348.1-201ENST00000623002 331 ntBASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AC009093.8-201ENST00000641769 292 ntBASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 AC002546.1-201ENST00000588041 2504 ntBASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.36□□□□□ -1.87
ATG4BQ9Y4P1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC068647.1-201ENST00000489539 2265 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 RNU6-878P-201ENST00000384578 110 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 RNU6-636P-201ENST00000384598 107 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 SNRPEP2-201ENST00000397592 279 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 RN7SKP53-201ENST00000411337 315 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC017079.2-201ENST00000416102 485 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC127526.1-201ENST00000417526 366 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AL513175.2-201ENST00000422071 443 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC002075.2-201ENST00000425207 252 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 EZH2P1-201ENST00000431167 291 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 MTND2P20-201ENST00000440805 661 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 PTENP1-201ENST00000447117 1215 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 SNORD105B-201ENST00000458770 79 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 RPL23AP62-201ENST00000463396 453 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC010285.1-201ENST00000470580 392 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC106707.2-201ENST00000484182 374 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 RPL23AP55-201ENST00000498163 452 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC006499.5-201ENST00000505037 514 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC010625.1-201ENST00000511296 403 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AP000926.4-201ENST00000527351 454 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 HIGD1AP17-201ENST00000554576 276 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AL132657.2-201ENST00000564417 358 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AP001269.3-201ENST00000588718 329 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC006116.10-201ENST00000591836 581 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC055876.5-201ENST00000605667 259 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 U4.6-201ENST00000621618 127 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 AC120349.2-201ENST00000625002 298 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 CDR1-202ENST00000625883 1485 ntBASIC3.35□□□□□ -1.87
ATG4BQ9Y4P1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 FRG1CP-201ENST00000358464 769 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 RNA5SP119-201ENST00000362715 117 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 SNORD116.1-201ENST00000365628 92 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AL590084.1-201ENST00000407885 387 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 RPS29P4-201ENST00000414733 161 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 OR1AA1P-201ENST00000419597 916 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 HSPD1P21-201ENST00000436541 245 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 PDSS1P2-201ENST00000449397 678 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC073387.1-201ENST00000453261 709 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 HMGN2P16-201ENST00000456802 261 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 RN7SL594P-201ENST00000470590 287 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms