Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 SULT1C2P1-202ENST00000562418 459 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 BNIP3P26-201ENST00000600827 554 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 AC105148.1-201ENST00000604961 409 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 SNORA5B-201ENST00000363786 132 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 RNU4-68P-201ENST00000364314 141 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 RNU6-413P-201ENST00000384115 107 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 SNORA48.8-201ENST00000391324 134 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 RNU2-28P-201ENST00000410457 189 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 AC092634.6-201ENST00000418558 192 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 AC104073.1-201ENST00000451988 151 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 RFC5P1-201ENST00000454419 874 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 AP000926.1-201ENST00000479573 241 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 DUXAP6-201ENST00000553858 601 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 AP000240.1-201ENST00000609910 452 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 AC138932.5-201ENST00000617759 563 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 AC022149.2-201ENST00000621061 203 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 MKKS-204ENST00000639674 192 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 AL359893.1-201ENST00000447628 1580 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 ZNF826P-207ENST00000622273 1910 ntBASIC6.37□□□□□ -1.39
SHROOM4Q9ULL8 AC130650.2-201ENST00000618736 2403 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 ZNF29P-201ENST00000225587 168 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 Y_RNA.25-201ENST00000362528 102 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 SNORA51.6-201ENST00000384151 125 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 AC092832.1-201ENST00000422934 400 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 AL121890.1-201ENST00000435457 205 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 AC134050.1-201ENST00000495088 933 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 MTCYBP16-201ENST00000509187 1129 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 MTCYBP37-201ENST00000510642 1133 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 AC006557.5-201ENST00000603126 811 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 AC068787.1-201ENST00000623908 691 ntBASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM4Q9ULL8 RNU6-560P-201ENST00000364007 108 ntBASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC092648.1-201ENST00000425870 423 ntBASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC073587.1-201ENST00000447093 876 ntBASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC092155.2-201ENST00000454675 477 ntBASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 TMEM248P1-201ENST00000510579 951 ntBASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 RN7SKP116-201ENST00000516902 319 ntBASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 PSMA2P1-201ENST00000526365 646 ntBASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AL049838.1-201ENST00000563647 981 ntBASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC068647.1-201ENST00000489539 2265 ntBASIC6.35□□□□□ -1.39
SHROOM4Q9ULL8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 MIR449A-201ENST00000362113 91 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 RNU1-70P-201ENST00000362618 164 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 CRP-203ENST00000368111 512 ntTSL 3 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 RPL23AP47-201ENST00000408017 460 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 MTCYBP24-201ENST00000420387 1106 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 RPL32P28-201ENST00000443577 397 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 AC004022.1-201ENST00000447766 1066 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 AC112198.1-201ENST00000505369 1220 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 AC103881.1-201ENST00000603476 538 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 AC113368.1-201ENST00000603736 382 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 DPRXP5-201ENST00000604662 539 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 CR381670.1-201ENST00000624291 1693 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 AC099786.3-201ENST00000565735 1410 ntBASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM4Q9ULL8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SHROOM4Q9ULL8 RNU4-22P-201ENST00000411058 166 ntBASIC6.34□□□□□ -1.4
SHROOM4Q9ULL8 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.34□□□□□ -1.4
SHROOM4Q9ULL8 RNU6-415P-201ENST00000516252 97 ntBASIC6.34□□□□□ -1.4
SHROOM4Q9ULL8 AC138915.2-201ENST00000569776 97 ntBASIC6.34□□□□□ -1.4
SHROOM4Q9ULL8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms