Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNA5SP216-201ENST00000516111 123 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AP004371.1-201ENST00000525240 214 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AC023161.2-201ENST00000551218 780 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 ISCA1P3-201ENST00000577104 373 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 VN1R90P-201ENST00000595717 726 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AC008751.2-201ENST00000597885 980 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 RNVU1-4-201ENST00000612985 164 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AL357080.1-201ENST00000617394 239 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AC018755.4-201ENST00000619715 454 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AL445264.1-201ENST00000621719 171 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AC019226.2-201ENST00000625973 424 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AC024560.2-201ENST00000507981 1497 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 AC058791.1-201ENST00000608412 3198 ntBASIC4.02□□□□□ -1.77
LIMA1Q9UHB6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 MIR372-201ENST00000362225 67 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 RNU1-13P-201ENST00000384499 162 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 RNU6-253P-201ENST00000384730 105 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 EI24P1-201ENST00000416584 867 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AL117339.2-201ENST00000430475 180 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 MUPP-201ENST00000438111 566 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 SNRPEP7-201ENST00000438350 220 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 MTND5P14-201ENST00000441481 1267 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 Z95327.1-201ENST00000446082 482 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC084357.1-201ENST00000473404 255 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 LINC00888-204ENST00000487386 421 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 RPS3AP22-201ENST00000488297 769 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC023424.2-201ENST00000493479 777 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 RNU6-579P-201ENST00000516879 102 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC006270.2-201ENST00000578523 652 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 BBIP1P1-201ENST00000602999 279 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC106791.2-201ENST00000604680 391 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC010738.1-201ENST00000604970 987 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AL034351.1-201ENST00000605288 668 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC055876.5-201ENST00000605667 259 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AL390208.1-201ENST00000605885 644 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC018816.2-201ENST00000621460 353 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 C2orf27A-204ENST00000623058 969 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AL732618.1-201ENST00000623251 301 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AP000553.6-201ENST00000641242 118 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC244517.1-201ENST00000606030 2086 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 AC087359.1-201ENST00000508335 1740 ntBASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LIMA1Q9UHB6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 AC011477.1-204ENST00000623416 1325 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 AC106871.1-201ENST00000568324 3102 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LIMA1Q9UHB6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIMA1Q9UHB6 RNU6-462P-201ENST00000362659 105 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 RNU6-343P-201ENST00000364709 104 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 CRP-202ENST00000368110 667 ntTSL 3 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 AL136116.1-201ENST00000403591 381 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 AC092447.6-201ENST00000414578 210 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 AC245052.5-201ENST00000416320 649 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 AC083875.1-201ENST00000419509 405 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 AL593851.1-201ENST00000426171 157 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 EZH2P1-201ENST00000431167 291 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 RPS6P15-201ENST00000431996 751 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 SDCBPP1-201ENST00000440192 890 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 MRPS31P2-201ENST00000451581 518 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 RPS4XP10-201ENST00000465034 731 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 RN7SKP122-201ENST00000515923 296 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4□□□□□ -1.77
LIMA1Q9UHB6 COX6CP8-201ENST00000522620 226 ntBASIC4□□□□□ -1.77
LIMA1Q9UHB6 NAP1L1P1-201ENST00000524793 1063 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms